RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 FRMD8P1Q9BZ68 369 aaPredicted RBP12.4□□□□□ -0.42
NDC1-202ENST00000480952 PLEKHF2Q9H8W4 249 aa12.4□□□□□ -0.42
NDC1-202ENST00000480952 EIF2B3Q9NR50 452 aaKnown RBP12.4□□□□□ -0.42
NDC1-202ENST00000480952 BEX4Q9NWD9 120 aaPredicted RBP12.4□□□□□ -0.42
NDC1-202ENST00000480952 ZNF223Q9UK11 482 aaPredicted RBP12.4□□□□□ -0.42
NDC1-202ENST00000480952 DHRS7Q9Y394 339 aa12.4□□□□□ -0.42
NDC1-202ENST00000480952 DNAJC13O75165 2243 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 HRNRQ86YZ3 2850 aaPredicted RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 TRBC2A0A5B9 178 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 BTNL10A8MVZ5 291 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 WWP2O00308 870 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 PRKNO60260 465 aaPredicted RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 EPXP11678 715 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 PAMP19021 973 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 RPL22P35268 128 aaKnown RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 SOX3P41225 446 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 ASCL1P50553 236 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 DCAF7P61962 342 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 BASP1P80723 227 aaKnown RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 MBOAT1Q6ZNC8 495 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 RTL4Q6ZR62 310 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 FAM47EQ6ZV65 393 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 SLC13A5Q86YT5 568 aaPredicted RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 KRTAP1-3Q8IUG1 177 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 PALM2Q8IXS6 379 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 ABHD11Q8NFV4 315 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 NT5CQ8TCD5 201 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 SREK1Q8WXA9 508 aaKnown RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 KCNJ9Q92806 393 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 GPR21Q99679 349 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 SH3GL2Q99962 352 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 HAUS8Q9BT25 410 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 SGPP1Q9BX95 441 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 MYOTQ9UBF9 498 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 MTRF1LQ9UGC7 380 aaKnown RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 SOX13Q9UN79 622 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 PPIEQ9UNP9 301 aaKnown RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 PDE10AQ9Y233 779 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 MED16Q9Y2X0 877 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 MMACHCQ9Y4U1 282 aa12.39□□□□□ -0.43
NDC1-202ENST00000480952 EPN1Q9Y6I3 576 aaPredicted RBP12.39□□□□□ -0.43
NDC1-202ENST00000480952 TRGV5A0A0B4J1U4 118 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 URADA6NGE7 173 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 HCN1O60741 890 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 FTCDO95954 541 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 P04436 131 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 F7P08709 466 aaPredicted RBP12.38□□□□□ -0.43
NDC1-202ENST00000480952 DNASE1L1P49184 302 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 GPR143P51810 404 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 BMPR2Q13873 1038 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 PHKG1Q16816 387 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 ZNF470Q6ECI4 717 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 KIAA0930Q6ICG6 404 aaPredicted RBP12.38□□□□□ -0.43
NDC1-202ENST00000480952 ZNF549Q6P9A3 640 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 STRA8Q7Z7C7 330 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 SYCE1Q8N0S2 351 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 CA13Q8N1Q1 262 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 RELL2Q8NC24 303 aaPredicted RBP12.38□□□□□ -0.43
NDC1-202ENST00000480952 OR4K1Q8NGD4 311 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 SNF8Q96H20 258 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 RASL10BQ96S79 203 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 YIPF4Q9BSR8 244 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 TSGA10Q9BZW7 698 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 LACRTQ9GZZ8 138 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 PARVBQ9HBI1 364 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 FBXO6Q9NRD1 293 aaPredicted RBP12.38□□□□□ -0.43
NDC1-202ENST00000480952 SACM1LQ9NTJ5 587 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 ZFP69BQ9UJL9 534 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 ADAMTS6Q9UKP5 1117 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 CSPG4Q6UVK1 2322 aa12.38□□□□□ -0.43
NDC1-202ENST00000480952 C8GP07360 202 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 HIST1H2AGP0C0S8 130 aaPredicted RBP12.37□□□□□ -0.43
NDC1-202ENST00000480952 CD53P19397 219 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 HIST1H2ADP20671 130 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 PPP2R1BP30154 601 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 SCTRP47872 440 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 SLC13A2Q13183 592 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 CTBP1Q13363 440 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
NDC1-202ENST00000480952 HYAL4Q2M3T9 481 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 FBXL19-AS1Q494R0 122 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 CASC4Q6P4E1 433 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 HSDL2Q6YN16 418 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 KIF18BQ86Y91 864 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 P3H2Q8IVL5 708 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 LINC01560Q8TB33 94 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 CD200R1Q8TD46 325 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 PYCR2Q96C36 320 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 HIST1H2AHQ96KK5 128 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 CAPZA3Q96KX2 299 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 SGCZQ96LD1 299 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 HIST1H2AJQ99878 128 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 AARSD1Q9BTE6 412 aaKnown RBP12.37□□□□□ -0.43
NDC1-202ENST00000480952 H2AFJQ9BTM1 129 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 PRTFDC1Q9NRG1 225 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 TUBA8Q9NY65 449 aaPredicted RBP12.37□□□□□ -0.43
NDC1-202ENST00000480952 SPRR3Q9UBC9 169 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms