RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 STRADBQ9C0K7 418 aa4.08□□□□□ -1.76
CALD1-219ENST00000480638 MOB1AQ9H8S9 216 aa4.08□□□□□ -1.76
CALD1-219ENST00000480638 OGTO15294 1046 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 CCND3P30281 292 aaPredicted RBP4.07□□□□□ -1.76
CALD1-219ENST00000480638 KHKP50053 298 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 BACE1P56817 501 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 BFSP1Q12934 665 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 GPR50Q13585 617 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 SLC25A30Q5SVS4 291 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 TEX35Q5T0J7 233 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 PLPP4Q5VZY2 271 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 MCM10Q7L590 875 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 LINC00612Q8N6U2 182 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 OR13C5Q8NGS8 318 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 CKAP2Q8WWK9 683 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 NABP1Q96AH0 204 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 BPIFA2Q96DR5 249 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 SPATA17Q96L03 361 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 C1orf147Q96MC9 270 aaPredicted RBP4.07□□□□□ -1.76
CALD1-219ENST00000480638 PARK7Q99497 189 aaKnown RBP4.07□□□□□ -1.76
CALD1-219ENST00000480638 HNRNPABQ99729 332 aaKnown RBP4.07□□□□□ -1.76
CALD1-219ENST00000480638 MLPHQ9BV36 600 aaPredicted RBP4.07□□□□□ -1.76
CALD1-219ENST00000480638 SLC39A8Q9C0K1 460 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 MTIF3Q9H2K0 278 aaKnown RBP4.07□□□□□ -1.76
CALD1-219ENST00000480638 TMED7Q9Y3B3 224 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 HCFC1P51610 2035 aa4.07□□□□□ -1.76
CALD1-219ENST00000480638 AGRNO00468 2067 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 TRGV8A0A0C4DH27 118 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 CCDC162PA2VCL2 907 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 FGF19O95750 216 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 HPP00738 406 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 SUPT20HL2P0C7V6 817 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 NOVP48745 357 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 RIDAP52758 137 aaKnown RBP4.06□□□□□ -1.76
CALD1-219ENST00000480638 CEACAM7Q14002 265 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 C15orf32Q32M92 178 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 FAM133BQ5BKY9 247 aaKnown RBP4.06□□□□□ -1.76
CALD1-219ENST00000480638 RFPL4BQ6ZWI9 263 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 GALNTL5Q7Z4T8 443 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 HPS6Q86YV9 775 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 C4orf32Q8N8J7 132 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 AFAP1L1Q8TED9 768 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 LIPHQ8WWY8 451 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 CCDC114Q96M63 670 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 UBAC1Q9BSL1 405 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 CCM2Q9BSQ5 444 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 TUFT1Q9NNX1 390 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 MRPL17Q9NRX2 175 aaKnown RBP4.06□□□□□ -1.76
CALD1-219ENST00000480638 GPR173Q9NS66 373 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 DNAJB9Q9UBS3 223 aa4.06□□□□□ -1.76
CALD1-219ENST00000480638 P2RX6O15547 441 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 PHF1O43189 567 aaPredicted RBP4.05□□□□□ -1.76
CALD1-219ENST00000480638 CLN5O75503 358 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 PRDM1O75626 825 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 GRAP2O75791 330 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 GSK3BP49841 420 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 FKBP1BP68106 108 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 C3AR1Q16581 482 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 IQCCQ4KMZ1 466 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 RFTN2Q52LD8 501 aaPredicted RBP4.05□□□□□ -1.76
CALD1-219ENST00000480638 C9orf66Q5T8R8 295 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 ZNF776Q68DI1 518 aaPredicted RBP4.05□□□□□ -1.76
CALD1-219ENST00000480638 PODNL1Q6PEZ8 512 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 Q6ZR54 194 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 RPAINQ86UA6 219 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 ELMOD1Q8N336 334 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 ATAD1Q8NBU5 361 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 RNF149Q8NC42 400 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 CSNK1G2-AS1Q8NCQ2 148 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 SEPT8Q92599 483 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 RFT1Q96AA3 541 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 ALKBH3Q96Q83 286 aaPredicted RBP4.05□□□□□ -1.76
CALD1-219ENST00000480638 RASL10BQ96S79 203 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 C17orf62Q9BQA9 187 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 WDR41Q9HAD4 459 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 DEPPQ9NTK1 212 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 CDH7Q9ULB5 785 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 AUP1Q9Y679 476 aa4.05□□□□□ -1.76
CALD1-219ENST00000480638 FER1L5A0AVI2 2057 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 IGHV3-16A0A0C4DH30 117 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 OOEPA6NGQ2 149 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 SLU7O95391 586 aaKnown RBP4.04□□□□□ -1.76
CALD1-219ENST00000480638 ACKR3P25106 362 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 AKAP17AQ02040 695 aaKnown RBP4.04□□□□□ -1.76
CALD1-219ENST00000480638 ACY1Q03154 408 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 POM121L1PQ3SYA9 428 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 EIPR1Q53HC9 387 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 CEACAM19Q7Z692 300 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 NLRP14Q86W24 1093 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 FGFRL1Q8N441 504 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 OR6F1Q8NGZ6 308 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 OR4Q3Q8NH05 313 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 C8orf46Q8TAG6 207 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 TNFRSF13CQ96RJ3 184 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 SRD5A3Q9H8P0 318 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 VIPAS39Q9H9C1 493 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 PLEKHA3Q9HB20 300 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 PRR34Q9NV39 138 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 VPS18Q9P253 973 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 ARMCX3Q9UH62 379 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms