RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ERV3-1Q14264 604 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 TMEM35AQ53FP2 167 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 VWA2Q5GFL6 755 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 MRPL14Q6P1L8 145 aaKnown RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 Q6ZSR9 355 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 CHSY3Q70JA7 882 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 TRIM46Q7Z4K8 759 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 CLYBLQ8N0X4 340 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 ESX1Q8N693 406 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 OR2T11Q8NH01 316 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 PPP1R14CQ8TAE6 165 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 PROKR1Q8TCW9 393 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 SELENOMQ8WWX9 145 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 REPS1Q96D71 796 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 MAGEB10Q96LZ2 347 aaPredicted RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 C3orf30Q96M34 536 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 C17orf62Q9BQA9 187 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 MESP1Q9BRJ9 268 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 MRPL1Q9BYD6 325 aaKnown RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 ACPTQ9BZG2 426 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 SLC7A5P2Q9GIP4 190 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 ELOVL6Q9H5J4 265 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 MED4Q9NPJ6 270 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 KCMF1Q9P0J7 381 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 CTSFQ9UBX1 484 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 HAO1Q9UJM8 370 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 CROTQ9UKG9 612 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 PPT2Q9UMR5 302 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 SNX6Q9UNH7 406 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 STK38LQ9Y2H1 464 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 FIS1Q9Y3D6 152 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 MRPS18BQ9Y676 258 aaKnown RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 FER1L5A0AVI2 2057 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 USP9YO00507 2555 aaPredicted RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 VSTM2BA6NLU5 285 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 CHST10O43529 356 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 JRKO75564 520 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 HSPA4LO95757 839 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 KRT6AP02538 564 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 GBAP04062 536 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 KRT6BP04259 564 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 FAM87AP0C7U9 286 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 LINC00032P0C843 101 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 NEFHP12036 1026 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 LIFP15018 202 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 ATP5A1P25705 553 aaKnown RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 HMOX2P30519 316 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 SERPINB1P30740 379 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 KRT6CP48668 564 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 STXBP1P61764 594 aaKnown RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 RPS18P62269 152 aaKnown RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 OCRLQ01968 901 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 TLE1Q04724 770 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 SPTAN1Q13813 2472 aaKnown RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 DSG2Q14126 1118 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 UBAP2LQ14157 1087 aaKnown RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 HERC3Q15034 1050 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 NDUFA9Q16795 377 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 SH2D4BQ5SQS7 431 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 MLIPQ5VWP3 458 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 OR4C11Q6IEV9 310 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 PRMT9Q6P2P2 845 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 RIPOR1Q6ZS17 1223 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 SHISA6Q6ZSJ9 500 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 CHTF18Q8WVB6 975 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 CKAP2Q8WWK9 683 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 UCN3Q969E3 161 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 GAL3ST3Q96A11 431 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 MVB12AQ96EY5 273 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 C11orf24Q96F05 449 aaPredicted RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 APIPQ96GX9 242 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 DPH2Q9BQC3 489 aaPredicted RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 BRF2Q9HAW0 419 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 EML4Q9HC35 981 aaKnown RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 ANKHQ9HCJ1 492 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 INTS9Q9NV88 658 aaKnown RBP11.56□□□□□ -0.56
TRA2B-212ENST00000480461 HCN3Q9P1Z3 774 aa11.56□□□□□ -0.56
TRA2B-212ENST00000480461 SCN3AQ9NY46 2000 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 IGLV3-12A0A075B6K2 115 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 WASHC1A8K0Z3 465 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 H0YIG0 161 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 KLF11O14901 512 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 TMPRSS11DO60235 418 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 ITGB2P05107 769 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 AGXTP21549 392 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 CERS1P27544 350 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 DLSTP36957 453 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 RAE1P78406 368 aaKnown RBP11.55□□□□□ -0.56
TRA2B-212ENST00000480461 KIAA0040Q15053 153 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 NKG7Q16617 165 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 ABHD13Q7L211 337 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 CA13Q8N1Q1 262 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 METTL4Q8N3J2 472 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 IL22RA1Q8N6P7 574 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 AMER2Q8N7J2 671 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 ENDOVQ8N8Q3 282 aaKnown RBP11.55□□□□□ -0.56
TRA2B-212ENST00000480461 ACOT4Q8N9L9 421 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 TMEM52Q8NDY8 209 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 OR51Q1Q8NH59 317 aa11.55□□□□□ -0.56
TRA2B-212ENST00000480461 SREK1Q8WXA9 508 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms