RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 ACTRT2Q8TDY3 377 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 UCN3Q969E3 161 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 C10orf90Q96M02 699 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 KCNC2Q96PR1 638 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 DEPDC7Q96QD5 511 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 CCT7Q99832 543 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 SIKE1Q9BRV8 207 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ZNF717Q9BY31 904 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 ANKHQ9HCJ1 492 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 PRDM7Q9NQW5 492 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 CUTCQ9NTM9 273 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 SIDT1Q9NXL6 827 aaKnown RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 AHSPQ9NZD4 102 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 HCN3Q9P1Z3 774 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 EIF3LQ9Y262 564 aaKnown RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 SPTBP11277 2137 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 MYOCOSA0A1B0GUC4 107 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 URADA6NGE7 173 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 FAM227AF5H4B4 570 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 VPS4BO75351 444 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 MYO1DO94832 1006 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 KLHL18O94889 574 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 SDC1P18827 310 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 SPINK2P20155 84 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 HIST1H1TP22492 207 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 ATP5A1P25705 553 aaKnown RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 TPP2P29144 1249 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 MAPK12P53778 367 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TAS2R50P59544 299 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 UFM1P61960 85 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 EMX2Q04743 252 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ERV3-1Q14264 604 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 CLPPQ16740 277 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 ADPRMQ3LIE5 342 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TMEM35AQ53FP2 167 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 SPIN4Q56A73 249 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 C10orf62Q5T681 223 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 PAOXQ6QHF9 649 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 SHISA6Q6ZSJ9 500 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 NUDT13Q86X67 352 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 PRSS58Q8IYP2 241 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 BMPERQ8N8U9 685 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 GAL3ST3Q96A11 431 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TEX37Q96LM6 180 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 SPSB2Q99619 263 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 MAPKAP1Q9BPZ7 522 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ULBP3Q9BZM4 244 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ACTR5Q9H9F9 607 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 AKIRIN1Q9H9L7 192 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 TXLNGQ9NUQ3 528 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 NOP53Q9NZM5 478 aaKnown RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 CCDC167Q9P0B6 97 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 C5AR2Q9P296 337 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TSC22D4Q9Y3Q8 395 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TMEM184BQ9Y519 407 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 B3GALT1Q9Y5Z6 326 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 COPG1Q9Y678 874 aaKnown RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 SCN3AQ9NY46 2000 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 MDC1Q14676 2089 aaKnown RBP6.09□□□□□ -1.44
HERC4-210ENST00000480158 LOC100653049A0A140TA62 436 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 SRRM3A6NNA2 597 aaPredicted RBP6.08□□□□□ -1.44
HERC4-210ENST00000480158 H3BMH7 237 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 FCHO1O14526 889 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 TXNDC9O14530 226 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 PLD2O14939 933 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 FOXS1O43638 330 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 GALR3O60755 368 aaPredicted RBP6.08□□□□□ -1.44
HERC4-210ENST00000480158 KRT34O76011 436 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 KIAA0754O94854 1291 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 FAM58BPP0C7Q3 252 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 PRR35P0CG20 571 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 EFNA1P20827 205 aaPredicted RBP6.08□□□□□ -1.44
HERC4-210ENST00000480158 GSTM2P28161 218 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 TIA1P31483 386 aaKnown RBP eCLIP6.08□□□□□ -1.44
HERC4-210ENST00000480158 MTTPP55157 894 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 PLIN5Q00G26 463 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 ZNF33BQ06732 778 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 TGM3Q08188 693 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 RUNX2Q13950 521 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 HERC3Q15034 1050 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 TERF2Q15554 542 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 NDUFA9Q16795 377 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 MUM1Q2TAK8 710 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 FAM214AQ32MH5 1076 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 C18orf63Q68DL7 685 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 FAM199XQ6PEV8 388 aaPredicted RBP6.08□□□□□ -1.44
HERC4-210ENST00000480158 PAGE2Q7Z2X7 111 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 TMEM132CQ8N3T6 1108 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 ANKS4BQ8N8V4 417 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 FAM47BQ8NA70 645 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 SRFBP1Q8NEF9 429 aaKnown RBP6.08□□□□□ -1.44
HERC4-210ENST00000480158 FAM122AQ96E09 287 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 PEX11GQ96HA9 241 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 TBCDQ9BTW9 1192 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 CCDC28BQ9BUN5 200 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 CHRNA10Q9GZZ6 450 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 TEX10Q9NXF1 929 aaPredicted RBP6.08□□□□□ -1.44
HERC4-210ENST00000480158 PSD3Q9NYI0 1048 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 TRIM33Q9UPN9 1127 aa6.08□□□□□ -1.44
HERC4-210ENST00000480158 ATG4BQ9Y4P1 393 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms