RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 KRTAP24-1Q3LI83 254 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 CHRFAM7AQ494W8 412 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 ANKRD20A2Q5SQ80 823 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 ANKRD20A1Q5TYW2 823 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 ANKRD20A3Q5VUR7 823 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 KCTD11Q693B1 232 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 PTRHD1Q6GMV3 140 aaKnown RBP10.34□□□□□ -0.75
CCDC18-208ENST00000479653 IFT20Q8IY31 132 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 OR5T3Q8NGG3 340 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 ATG4AQ8WYN0 398 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 SMPDL3BQ92485 455 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 PRAP1Q96NZ9 151 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 OR1F2PQ96R84 312 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 FAM173AQ9BQD7 235 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 FAM129AQ9BZQ8 928 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 LIN28AQ9H9Z2 209 aaKnown RBP10.34□□□□□ -0.75
CCDC18-208ENST00000479653 IL1RL2Q9HB29 575 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 ARNT2Q9HBZ2 717 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 PIH1D1Q9NWS0 290 aaKnown RBP10.34□□□□□ -0.75
CCDC18-208ENST00000479653 SPRR3Q9UBC9 169 aa10.34□□□□□ -0.75
CCDC18-208ENST00000479653 SH3D21A4FU49 640 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 CTIFO43310 598 aaKnown RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 RAD51CO43502 376 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 CNR1P21554 472 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 JAK1P23458 1154 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 CEACAM8P31997 349 aaPredicted RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 PTH2RP49190 550 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 BTG2P78543 158 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 RELAQ04206 551 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 ZNF750Q32MQ0 723 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 ANKRD20A4Q4UJ75 823 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 THEMIS2Q5TEJ8 643 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 TMEM214Q6NUQ4 689 aaKnown RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 POMZP3Q6PJE2 187 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 KIAA0408Q6ZU52 694 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 FAM47EQ6ZV65 393 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 OTOAQ7RTW8 1153 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 PDSS2Q86YH6 399 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 ARMC10Q8N2F6 343 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 FBXW8Q8N3Y1 598 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 EIF1ADQ8N9N8 165 aaKnown RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 KCT2Q8NC54 265 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 BBOF1Q8ND07 529 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 PPFIBP2Q8ND30 876 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 NFAM1Q8NET5 270 aaPredicted RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 OR9A1PQ8NGU1 263 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 ASB15Q8WXK1 588 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 TBC1D20Q96BZ9 403 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 EBNA1BP2Q99848 306 aaKnown RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 ERP44Q9BS26 406 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 LRRC1Q9BTT6 524 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 C6orf203Q9P0P8 240 aaPredicted RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 YARS2Q9Y2Z4 477 aaKnown RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 NPFFR2Q9Y5X5 522 aa10.33□□□□□ -0.76
CCDC18-208ENST00000479653 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.33□□□□□ -0.76
CCDC18-208ENST00000479653 MEGF8Q7Z7M0 2845 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 A0A087X1B8 175 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 SMAPO00193 183 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 HCN1O60741 890 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 OR2J2O76002 312 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 OR6B1O95007 311 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 EPPINO95925 133 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 GOT2P00505 430 aaKnown RBP10.32□□□□□ -0.76
CCDC18-208ENST00000479653 RHOXF2BP0C7M4 288 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 ENDOUP21128 410 aaKnown RBP10.32□□□□□ -0.76
CCDC18-208ENST00000479653 MAOAP21397 527 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 PPARGP37231 505 aaPredicted RBP10.32□□□□□ -0.76
CCDC18-208ENST00000479653 KCNJ1P48048 391 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 DNASE1L1P49184 302 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 ZNF136P52737 540 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 ABATP80404 500 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 MEF2AQ02078 507 aaPredicted RBP10.32□□□□□ -0.76
CCDC18-208ENST00000479653 TNK1Q13470 666 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 CUL1Q13616 776 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 ERCC6LQ2NKX8 1250 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 P3H1Q32P28 736 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 TTC27Q6P3X3 843 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 VN1R4Q7Z5H5 301 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 GPALPP1Q8IXQ4 340 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 CAMKVQ8NCB2 501 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 FBXO15Q8NCQ5 510 aaPredicted RBP10.32□□□□□ -0.76
CCDC18-208ENST00000479653 OR6P1Q8NGX9 317 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 SREK1Q8WXA9 508 aaKnown RBP10.32□□□□□ -0.76
CCDC18-208ENST00000479653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCDC18-208ENST00000479653 ISL2Q96A47 359 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 PPP1R2P1Q96PQ5 205 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 RHOXF2Q9BQY4 288 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 CCDC77Q9BR77 488 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 C19orf24Q9BVV8 132 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 FAM114A2Q9NRY5 505 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 PAK5Q9P286 719 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 ASIC3Q9UHC3 531 aa10.32□□□□□ -0.76
CCDC18-208ENST00000479653 KDM4EB2RXH2 506 aaPredicted RBP10.31□□□□□ -0.76
CCDC18-208ENST00000479653 RNF223E7ERA6 249 aa10.31□□□□□ -0.76
CCDC18-208ENST00000479653 CHST10O43529 356 aa10.31□□□□□ -0.76
CCDC18-208ENST00000479653 MYO1DO94832 1006 aa10.31□□□□□ -0.76
CCDC18-208ENST00000479653 IFNB1P01574 187 aa10.31□□□□□ -0.76
CCDC18-208ENST00000479653 KRT14P02533 472 aa10.31□□□□□ -0.76
CCDC18-208ENST00000479653 TIMP3P35625 211 aa10.31□□□□□ -0.76
CCDC18-208ENST00000479653 PNLIPRP1P54315 467 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms