RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 RNF130Q86XS8 419 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 LRRC56Q8IYG6 542 aaPredicted RBP23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 NATD1Q8N6N6 113 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 COQ10AQ96MF6 247 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 SAMD11Q96NU1 681 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 GULP1Q9UBP9 304 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 DUSP12Q9UNI6 340 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 EFCAB14O75071 495 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 OR1E2P47887 323 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 ALDH9A1P49189 494 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 SLC5A12Q1EHB4 618 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 INAVAQ3KP66 663 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 LY6G5CQ5SRR4 150 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 ZNF765Q7L2R6 523 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 SLC22A16Q86VW1 577 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 WDR48Q8TAF3 677 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 ZNF514Q96K75 400 aaPredicted RBP23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 GPR83Q9NYM4 423 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 SCHIP1Q9P0W5 487 aaPredicted RBP23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 A0A1W2PRB8 838 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 CCL16O15467 120 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 LILRB5O75023 590 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 STSP08842 583 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 UQCRC2P22695 453 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 RGS6P49758 472 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 TAS2R50P59544 299 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 ST3GAL4Q11206 333 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 DNASE1L3Q13609 305 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 TIMM50Q3ZCQ8 353 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 TRIM60Q495X7 471 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 PNCKQ6P2M8 343 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 OR52J3Q8NH60 311 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 CYB5D2Q8WUJ1 264 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 CIDECQ96AQ7 238 aaPredicted RBP23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 DEFB118Q96PH6 123 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 WRAP53Q9BUR4 548 aaKnown RBP23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 INIPQ9NRY2 104 aa23.55■■□□□ 1.36
SYNGAP1-206ENST00000479510 C17orf113A0A1B0GUU1 675 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 KLHL18O94889 574 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 GADD45GO95257 159 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 TNFRSF1BP20333 461 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 PBLDP30039 288 aaPredicted RBP23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 IRS1P35568 1242 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 GSSP48637 474 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 EIF2B2P49770 351 aaKnown RBP23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 TAP2Q03519 686 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 ZNF77Q15935 545 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 LYSMD2Q8IV50 215 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 SLC44A2Q8IWA5 706 aaPredicted RBP23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 CFAP206Q8IYR0 622 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 UTP15Q8TED0 518 aaKnown RBP23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 LINC00615Q96LM1 132 aaPredicted RBP23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 FAM129BQ96TA1 746 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 OR51B5Q9H339 312 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 CCDC177Q9NQR7 707 aaPredicted RBP23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 ANKMY1Q9P2S6 941 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 KCND3Q9UK17 655 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 TRIM17Q9Y577 477 aa23.54■■□□□ 1.36
SYNGAP1-206ENST00000479510 PCM1Q15154 2024 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 CXCL14O95715 111 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 TGFB1P01137 390 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 SERPINB1P30740 379 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 S100A5P33763 92 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 TGFBR1P36897 503 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 ARMCX4Q5H9R4 360 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 RTL10Q7L3V2 364 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 SNX29P2Q8IUI4 249 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 LINC00597Q9H2U6 94 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 DPEP2Q9H4A9 486 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 MAP4K5Q9Y4K4 846 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 PEX16Q9Y5Y5 336 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 ZAR1LA6NP61 321 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 CACNB4O00305 520 aaPredicted RBP23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 PI15O43692 258 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 TBX19O60806 448 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 FKTNO75072 461 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 IFNW1P05000 195 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 PIPP12273 146 aaPredicted RBP23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 DDX5P17844 614 aaKnown RBP23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 MC1RQ01726 317 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 KRR1Q13601 381 aaKnown RBP23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 TEAD2Q15562 447 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 C1orf53Q5VUE5 145 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 REEP3Q6NUK4 255 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 C19orf48Q6RUI8 117 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 CDADC1Q9BWV3 514 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 AMBNQ9NP70 447 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 MS4A12Q9NXJ0 267 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 AHSPQ9NZD4 102 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 SH2B3Q9UQQ2 575 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 MYOFQ9NZM1 2061 aa23.53■■□□□ 1.36
SYNGAP1-206ENST00000479510 PRAMEF33A0A0G2JMD5 474 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 TRBC2A0A5B9 178 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 KDM1AO60341 852 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 PRAMEF10O60809 474 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 DSTNP60981 165 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 TPRG1LQ5T0D9 272 aa23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 NCCRP1Q6ZVX7 275 aaPredicted RBP23.52■■□□□ 1.36
SYNGAP1-206ENST00000479510 PARS2Q7L3T8 475 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms