RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 OR6B1O95007 311 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 GOSR1O95249 250 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 HIST1H2AGP0C0S8 130 aaPredicted RBP14.93□□□□□ -0.02
DDX56-210ENST00000479440 TPSB2P20231 275 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 HIST1H2ADP20671 130 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 AHRP35869 848 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 RAB8AP61006 207 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 CTBP1Q13363 440 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 DHX34Q14147 1143 aaKnown RBP14.93□□□□□ -0.02
DDX56-210ENST00000479440 TPSAB1Q15661 275 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 HSPB2Q16082 182 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 PHKG1Q16816 387 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 TMEM198Q66K66 360 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 UGT3A1Q6NUS8 523 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 ZNF549Q6P9A3 640 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 RTL4Q6ZR62 310 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 SLC13A5Q86YT5 568 aaPredicted RBP14.93□□□□□ -0.02
DDX56-210ENST00000479440 MYO1HQ8N1T3 1032 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 GPATCH11Q8N954 259 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 OR4K1Q8NGD4 311 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 NUDT8Q8WV74 236 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 RNASE6Q93091 150 aaKnown RBP14.93□□□□□ -0.02
DDX56-210ENST00000479440 HIST1H2AHQ96KK5 128 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 HIST1H2AJQ99878 128 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 AARSD1Q9BTE6 412 aaKnown RBP14.93□□□□□ -0.02
DDX56-210ENST00000479440 H2AFJQ9BTM1 129 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 REPIN1Q9BWE0 567 aaKnown RBP14.93□□□□□ -0.02
DDX56-210ENST00000479440 NEUROD4Q9HD90 331 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 ADAP2Q9NPF8 381 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 TRMT6Q9UJA5 497 aaKnown RBP14.93□□□□□ -0.02
DDX56-210ENST00000479440 FOXD3Q9UJU5 478 aaPredicted RBP14.93□□□□□ -0.02
DDX56-210ENST00000479440 ADAMTS6Q9UKP5 1117 aa14.93□□□□□ -0.02
DDX56-210ENST00000479440 G3V3Y1 287 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 DVL2O14641 736 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 HCN1O60741 890 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 NPPBP16860 134 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 CNR1P21554 472 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 TACR1P25103 407 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 HOXC12P31275 282 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 SOX3P41225 446 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 SLC1A2P43004 574 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 SCTRP47872 440 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 SARNPP82979 210 aaKnown RBP14.92□□□□□ -0.02
DDX56-210ENST00000479440 FAM47EQ6ZV65 393 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 GSTA5Q7RTV2 222 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 DENND6AQ8IWF6 608 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 SCUBE1Q8IWY4 988 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 CA13Q8N1Q1 262 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 FBXW8Q8N3Y1 598 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 GOLM1Q8NBJ4 401 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 TRPV3Q8NET8 790 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 ZNF669Q96BR6 464 aaPredicted RBP14.92□□□□□ -0.02
DDX56-210ENST00000479440 ARSGQ96EG1 525 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 SNF8Q96H20 258 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 RASL10BQ96S79 203 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 SACM1LQ9NTJ5 587 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 MYOTQ9UBF9 498 aa14.92□□□□□ -0.02
DDX56-210ENST00000479440 MTRF1LQ9UGC7 380 aaKnown RBP14.92□□□□□ -0.02
DDX56-210ENST00000479440 TRGV5A0A0B4J1U4 118 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 ATP6AP2A0A1C7CYW4 349 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 PRKNO60260 465 aaPredicted RBP14.91□□□□□ -0.02
DDX56-210ENST00000479440 ATP6AP2O75787 350 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 P04436 131 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 HNF4AP41235 474 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 DCAF7P61962 342 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 DHX9Q08211 1270 aaKnown RBP14.91□□□□□ -0.02
DDX56-210ENST00000479440 KIF5AQ12840 1032 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 CSHL1Q14406 222 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 DAZAP2Q15038 168 aaPredicted RBP14.91□□□□□ -0.02
DDX56-210ENST00000479440 PCBP2Q15366 365 aaKnown RBP eCLIP14.91□□□□□ -0.02
DDX56-210ENST00000479440 HYAL4Q2M3T9 481 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 SHEQ5VZ18 495 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 DUPD1Q68J44 220 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 C16orf47Q6ZP98 133 aaPredicted RBP14.91□□□□□ -0.02
DDX56-210ENST00000479440 LMNTD2Q8IXW0 634 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 RELL2Q8NC24 303 aaPredicted RBP14.91□□□□□ -0.02
DDX56-210ENST00000479440 CALML6Q8TD86 181 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 SLC5A11Q8WWX8 675 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 SGCZQ96LD1 299 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 SH3GL2Q99962 352 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 ZNF395Q9H8N7 513 aaPredicted RBP14.91□□□□□ -0.02
DDX56-210ENST00000479440 PRTFDC1Q9NRG1 225 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 ALKBH4Q9NXW9 302 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 MRPS33Q9Y291 106 aaKnown RBP14.91□□□□□ -0.02
DDX56-210ENST00000479440 PCDHGB3Q9Y5G1 929 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 ACANP16112 2415 aa14.91□□□□□ -0.02
DDX56-210ENST00000479440 CLDN4O14493 209 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 F7P08709 466 aaPredicted RBP14.9□□□□□ -0.02
DDX56-210ENST00000479440 BMP5P22003 454 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 HSD17B7P56937 341 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 REEP5Q00765 189 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 SLC13A2Q13183 592 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 BMPR2Q13873 1038 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 SLC10A1Q14973 349 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 ELAVL1Q15717 326 aaKnown RBP14.9□□□□□ -0.02
DDX56-210ENST00000479440 CCNG2Q16589 344 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 FBXL19-AS1Q494R0 122 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 XKR6Q5GH73 641 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 CATSPEREQ5SY80 951 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 RAD9BQ6WBX8 426 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms