RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLCO2A1Q92959 643 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 SARAFQ96BY9 339 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 LRRC46Q96FV0 321 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 SNF8Q96H20 258 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 PDLIM2Q96JY6 352 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 FAM173AQ9BQD7 235 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 CNPPD1Q9BV87 410 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 LDAHQ9H6V9 325 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 SAMD15Q9P1V8 674 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 ZFP69BQ9UJL9 534 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 CBLCQ9ULV8 474 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 PPIEQ9UNP9 301 aaKnown RBP15.94■□□□□ 0.14
VIM-204ENST00000478746 MMACHCQ9Y4U1 282 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 COMMD10Q9Y6G5 202 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 EML6Q6ZMW3 1958 aa15.94■□□□□ 0.14
VIM-204ENST00000478746 EIF3FO00303 357 aaPredicted RBP15.93■□□□□ 0.14
VIM-204ENST00000478746 PRKNO60260 465 aaPredicted RBP15.93■□□□□ 0.14
VIM-204ENST00000478746 AVILO75366 819 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 OR6B1O95007 311 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 ATE1O95260 518 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 C8GP07360 202 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 HOXC12P31275 282 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 GPR143P51810 404 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 CDK16Q00536 496 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 DAZAP2Q15038 168 aaPredicted RBP15.93■□□□□ 0.14
VIM-204ENST00000478746 ZNF750Q32MQ0 723 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 CASC4Q6P4E1 433 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 DENND6AQ8IWF6 608 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 EEF1AKMT1Q8WVE0 214 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 MDFIQ99750 246 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 EXO5Q9H790 373 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 IL1RL2Q9HB29 575 aa15.93■□□□□ 0.14
VIM-204ENST00000478746 ATP6AP2A0A1C7CYW4 349 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 ATP6AP2O75787 350 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 HIST1H2AGP0C0S8 130 aaPredicted RBP15.92■□□□□ 0.14
VIM-204ENST00000478746 SMIM10L1P0DMW3 83 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 GABRA1P14867 456 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 HIST1H2ADP20671 130 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 AHRP35869 848 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 SOX3P41225 446 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 DHX34Q14147 1143 aaKnown RBP15.92■□□□□ 0.14
VIM-204ENST00000478746 CCNG2Q16589 344 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 LRRC8EQ6NSJ5 796 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 RAD9BQ6WBX8 426 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 CHSY3Q70JA7 882 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 GSTA5Q7RTV2 222 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 CA13Q8N1Q1 262 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 PYCR2Q96C36 320 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 ARSGQ96EG1 525 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 SMIM10Q96HG1 83 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 HIST1H2AHQ96KK5 128 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 HIST1H2AJQ99878 128 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 H2AFJQ9BTM1 129 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 NEUROD4Q9HD90 331 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 MYOTQ9UBF9 498 aa15.92■□□□□ 0.14
VIM-204ENST00000478746 FN1P02751 2386 aaKnown RBP15.91■□□□□ 0.14
VIM-204ENST00000478746 TCRBV7S3A2A0A539 114 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 HSPB2A8KAH6 182 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 WWP2O00308 870 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 CELA3AP09093 270 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 TPSB2P20231 275 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 SCTRP47872 440 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 RGS4P49798 205 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 SARNPP82979 210 aaKnown RBP15.91■□□□□ 0.14
VIM-204ENST00000478746 KIF5AQ12840 1032 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 BMPR2Q13873 1038 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 CSHL1Q14406 222 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 TPSAB1Q15661 275 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 HSPB2Q16082 182 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 CATSPEREQ5SY80 951 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 ARMC3Q5W041 872 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 DUPD1Q68J44 220 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 UGT3A1Q6NUS8 523 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 RTL4Q6ZR62 310 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 FAM47EQ6ZV65 393 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 PRIMA1Q86XR5 153 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 TRPV3Q8NET8 790 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 NUDT8Q8WV74 236 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 RNASE6Q93091 150 aaKnown RBP15.91■□□□□ 0.14
VIM-204ENST00000478746 RASL10BQ96S79 203 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 KLHL31Q9H511 634 aa15.91■□□□□ 0.14
VIM-204ENST00000478746 TRMT6Q9UJA5 497 aaKnown RBP15.91■□□□□ 0.14
VIM-204ENST00000478746 ARHGAP21Q5T5U3 1957 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 TRGV5A0A0B4J1U4 118 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 MAGEB16A2A368 324 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 FAM171A2A8MVW0 826 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 KIAA1324LA8MWY0 1029 aaPredicted RBP15.9■□□□□ 0.14
VIM-204ENST00000478746 CLDN4O14493 209 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 HCN1O60741 890 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 HAUS5O94927 633 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 HEXAP06865 529 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 PPP2R1BP30154 601 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 TERF1P54274 439 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 SP140Q13342 867 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 HYAL4Q2M3T9 481 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 SCUBE1Q8IWY4 988 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 SREK1Q8WXA9 508 aaKnown RBP15.9■□□□□ 0.14
VIM-204ENST00000478746 ZNF669Q96BR6 464 aaPredicted RBP15.9■□□□□ 0.14
VIM-204ENST00000478746 SCYL1Q96KG9 808 aa15.9■□□□□ 0.14
VIM-204ENST00000478746 OR4K3Q96R72 315 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms