RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SYCE1Q8N0S2 351 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 SPATA3Q8NHX4 192 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 C1orf54Q8WWF1 131 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 NANOS1Q8WY41 292 aaKnown RBP18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 RNASE6Q93091 150 aaKnown RBP18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 RASL10BQ96S79 203 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 GPR21Q99679 349 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 CNPPD1Q9BV87 410 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 CCDC68Q9H2F9 335 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 NEUROD4Q9HD90 331 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 SAMD15Q9P1V8 674 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 ZFP69BQ9UJL9 534 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 ADAMTS6Q9UKP5 1117 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 PDE10AQ9Y233 779 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 EPN1Q9Y6I3 576 aaPredicted RBP18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 TLN2Q9Y4G6 2542 aa18.77■□□□□ 0.6
PDLIM1-202ENST00000477757 F7P08709 466 aaPredicted RBP18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 TACR1P25103 407 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 DCAF7P61962 342 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 BASP1P80723 227 aaKnown RBP18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 FOXO1Q12778 655 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 SNX1Q13596 522 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 CHSY3Q70JA7 882 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 CXXC5Q7LFL8 322 aaKnown RBP18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 SCUBE1Q8IWY4 988 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 TBC1D19Q8N5T2 526 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 ALKBH8Q96BT7 664 aaKnown RBP18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 LRRC46Q96FV0 321 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 HES6Q96HZ4 224 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 RHBGQ9H310 441 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 PLEKHF2Q9H8W4 249 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 MYOTQ9UBF9 498 aa18.76■□□□□ 0.59
PDLIM1-202ENST00000477757 HSPB2A8KAH6 182 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 HCN1O60741 890 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 AVILO75366 819 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 PAMP19021 973 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 ENDOUP21128 410 aaKnown RBP18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 CNR1P21554 472 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 PPP2R1BP30154 601 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 RAB8AP61006 207 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 SP140Q13342 867 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 HSPB2Q16082 182 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 HECTD2Q5U5R9 776 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 ARMC3Q5W041 872 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 FBXW10Q5XX13 1052 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 LRRC8EQ6NSJ5 796 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 RTL4Q6ZR62 310 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 CA13Q8N1Q1 262 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 COX4I2Q96KJ9 171 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 LIN28AQ9H9Z2 209 aaKnown RBP18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 FBXO6Q9NRD1 293 aaPredicted RBP18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 PNO1Q9NRX1 252 aaKnown RBP18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 BEX4Q9NWD9 120 aaPredicted RBP18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 FOXD3Q9UJU5 478 aaPredicted RBP18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 CLDN16Q9Y5I7 305 aa18.75■□□□□ 0.59
PDLIM1-202ENST00000477757 ARHGAP21Q5T5U3 1957 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 ATP6AP2A0A1C7CYW4 349 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 CTAGE9A4FU28 777 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 DVL2O14641 736 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 ATP6AP2O75787 350 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 LY6G6DO95868 133 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 C8GP07360 202 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 BMP5P22003 454 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 AHRP35869 848 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 SCTRP47872 440 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 CTBP1Q13363 440 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 PCBP2Q15366 365 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 SHEQ5VZ18 495 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 SEM1Q6ZVN7 128 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 SLC13A5Q86YT5 568 aaPredicted RBP18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 DENND6AQ8IWF6 608 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 GOLM1Q8NBJ4 401 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 TSGA10Q9BZW7 698 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 SPNS1Q9H2V7 528 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 LDAHQ9H6V9 325 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 ZNF395Q9H8N7 513 aaPredicted RBP18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 PARVBQ9HBI1 364 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 SPRR3Q9UBC9 169 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 PCDHGB3Q9Y5G1 929 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 COMMD10Q9Y6G5 202 aa18.74■□□□□ 0.59
PDLIM1-202ENST00000477757 TRGV5A0A0B4J1U4 118 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 URADA6NGE7 173 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 C4orf51C9J302 202 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 TGFBR3LH3BV60 316 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 GOSR1O95249 250 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 SMIM10L1P0DMW3 83 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 HNF4AP41235 474 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 NKX6-1P78426 367 aaPredicted RBP18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 CDK16Q00536 496 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 DHX9Q08211 1270 aaKnown RBP18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 ZNF750Q32MQ0 723 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 BBS9Q3SYG4 887 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 SEL1L2Q5TEA6 688 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 C4orf22Q6V702 233 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 FBXW8Q8N3Y1 598 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 NAXEQ8NCW5 288 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 SNF8Q96H20 258 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 SMIM10Q96HG1 83 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 SCYL1Q96KG9 808 aa18.73■□□□□ 0.59
PDLIM1-202ENST00000477757 OR4K3Q96R72 315 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms