RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 IGKV3D-11A0A0A0MRZ8 115 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 A0A1B0GTL3 188 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 MAGEB17A8MXT2 336 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 FAM227AF5H4B4 570 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 B3GALT2O43825 422 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 DPM1O60762 260 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 B4GALT2O60909 372 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 CDH16O75309 829 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 GLRA3O75311 464 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 SH3BGRLO75368 114 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 SCELO95171 688 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 TGFB1P01137 390 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 ALPPP05187 535 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 PRR35P0CG20 571 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 ZNF10P21506 573 aaPredicted RBP13.24□□□□□ -0.29
SRRT-210ENST00000477529 PIK3CBP42338 1070 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 HNRNPFP52597 415 aaKnown RBP13.24□□□□□ -0.29
SRRT-210ENST00000477529 MTTPP55157 894 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 HERVK_113P63132 956 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 TLE1Q04724 770 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 RUNX2Q13950 521 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 CPSF6Q16630 551 aaKnown RBP eCLIP13.24□□□□□ -0.295e-6■■□□□ 12.7
SRRT-210ENST00000477529 IGFL3Q6UXB1 125 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 UBE3DQ7Z6J8 389 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 HPS6Q86YV9 775 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 KBTBD2Q8IY47 623 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 TEX19Q8NA77 164 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 OR2W6PQ8NHA6 318 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 PSMF1Q92530 271 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 CAVIN3Q969G5 261 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 IMMP1LQ96LU5 166 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 KCNC2Q96PR1 638 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 SERINC2Q96SA4 455 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 CSF3RQ99062 836 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 MTERF1Q99551 399 aaKnown RBP13.24□□□□□ -0.29
SRRT-210ENST00000477529 TUBB6Q9BUF5 446 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 NTMT1Q9BV86 223 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 ERVK-6Q9BXR3 956 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 TRIM4Q9C037 500 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 OR51B5Q9H339 312 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 COPS7BQ9H9Q2 264 aaPredicted RBP13.24□□□□□ -0.29
SRRT-210ENST00000477529 SEMA4BQ9NPR2 832 aaPredicted RBP13.24□□□□□ -0.29
SRRT-210ENST00000477529 DAPP1Q9UN19 280 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 PCDHGA11Q9Y5H2 935 aa13.24□□□□□ -0.29
SRRT-210ENST00000477529 TCRBV16S1A1N1A0A5B0 115 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 PSMD12O00232 456 aaPredicted RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 RTCAO00442 366 aaKnown RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 DLX3O60479 287 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 KLHL41O60662 606 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 SORBS2O94875 1100 aaKnown RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 CLDN9O95484 217 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 SERPINA7P05543 415 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 ITGAMP11215 1152 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 KRT15P19012 456 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 MAOAP21397 527 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 ARL1P40616 181 aaPredicted RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 CCNG1P51959 295 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 LIM2P55344 173 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 RAB38P57729 211 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 RPS13P62277 151 aaKnown RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 BTG2P78543 158 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 TGM3Q08188 693 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 ZRSR2Q15696 482 aaKnown RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 NSDHLQ15738 373 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 GGTA1PQ4G0N0 100 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 TMEM35AQ53FP2 167 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 SFT2D3Q587I9 215 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 AGAP7PQ5VUJ5 663 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 IRAK1BP1Q5VVH5 260 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 KHDRBS2Q5VWX1 349 aaKnown RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 FAM219BQ5XKK7 198 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 SLC6A19Q695T7 634 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 IGFL2Q6UWQ7 119 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 RIPOR1Q6ZS17 1223 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 Q8NA96 180 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 TMEM52Q8NDY8 209 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 BRIX1Q8TDN6 353 aaKnown RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 REPS1Q96D71 796 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 CMTM7Q96FZ5 175 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 AGAP4Q96P64 663 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 SORBS1Q9BX66 1292 aaKnown RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 ZNF717Q9BY31 904 aaPredicted RBP13.23□□□□□ -0.29
SRRT-210ENST00000477529 PRDM9Q9NQV7 894 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 ADGRE2Q9UHX3 823 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 CLDN16Q9Y5I7 305 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 CSAG2Q9Y5P2 127 aa13.23□□□□□ -0.29
SRRT-210ENST00000477529 ASH1LQ9NR48 2969 aaKnown RBP13.22□□□□□ -0.29
SRRT-210ENST00000477529 TGFBR3LH3BV60 316 aa13.22□□□□□ -0.29
SRRT-210ENST00000477529 PYCARD-AS1I3L0S3 204 aa13.22□□□□□ -0.29
SRRT-210ENST00000477529 SAP18O00422 153 aaKnown RBP13.22□□□□□ -0.29
SRRT-210ENST00000477529 PPP6CO00743 305 aa13.22□□□□□ -0.29
SRRT-210ENST00000477529 PLPP1O14494 284 aa13.22□□□□□ -0.29
SRRT-210ENST00000477529 PRMT3O60678 531 aa13.22□□□□□ -0.29
SRRT-210ENST00000477529 ETHE1O95571 254 aa13.22□□□□□ -0.29
SRRT-210ENST00000477529 TSPAN8P19075 237 aa13.22□□□□□ -0.29
SRRT-210ENST00000477529 TAC1P20366 129 aa13.22□□□□□ -0.29
SRRT-210ENST00000477529 HIST1H1TP22492 207 aaPredicted RBP13.22□□□□□ -0.29
SRRT-210ENST00000477529 ATP5A1P25705 553 aaKnown RBP13.22□□□□□ -0.29
SRRT-210ENST00000477529 SOX11P35716 441 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms