RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 PPT2Q9UMR5 302 aa13.62□□□□□ -0.23
ABCF3-211ENST00000475728 RNF11Q9Y3C5 154 aa13.62□□□□□ -0.23
ABCF3-211ENST00000475728 MMACHCQ9Y4U1 282 aa13.62□□□□□ -0.23
ABCF3-211ENST00000475728 COL6A6A6NMZ7 2263 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 BLACEA4D250 179 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 H3BQF6 201 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 PRMT3O60678 531 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 DPM1O60762 260 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ERLIN1O75477 346 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 TBX6O95947 436 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-211ENST00000475728 B3GALT4O96024 378 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 TGFB1P01137 390 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 SERPINA7P05543 415 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 COX6A1P12074 109 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 RAB38P57729 211 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 RHAGQ02094 409 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 CLCQ05315 142 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 EEF1A2Q05639 463 aaKnown RBP13.61□□□□□ -0.23
ABCF3-211ENST00000475728 SLC18A2Q05940 514 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ACTN3Q08043 901 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-211ENST00000475728 KLRB1Q12918 225 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 TRAF3Q13114 568 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 CUL3Q13618 768 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ABRAXAS2Q15018 415 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ZNF678Q5SXM1 525 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 FRG2Q64ET8 278 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ADNP2Q6IQ32 1131 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 JMJD6Q6NYC1 403 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ZYG11AQ6WRX3 759 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 QSOX2Q6ZRP7 698 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 CPEB2Q7Z5Q1 589 aaKnown RBP13.61□□□□□ -0.23
ABCF3-211ENST00000475728 TMEM151BQ8IW70 566 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 CCDC63Q8NA47 563 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 TEX19Q8NA77 164 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 OR52B6Q8NGF0 335 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 C8orf44Q96CB5 159 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 L3HYPDHQ96EM0 354 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 NSUN5Q96P11 429 aaKnown RBP13.61□□□□□ -0.23
ABCF3-211ENST00000475728 FRG2BQ96QU4 278 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 MTERF1Q99551 399 aaKnown RBP13.61□□□□□ -0.23
ABCF3-211ENST00000475728 SERPINI1Q99574 410 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ELOVL6Q9H5J4 265 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ZNF160Q9HCG1 818 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 ZBTB26Q9HCK0 441 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 LYRM4Q9HD34 91 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 MKS1Q9NXB0 559 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 SNX6Q9UNH7 406 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 PLAAQ9Y263 795 aa13.61□□□□□ -0.23
ABCF3-211ENST00000475728 A0A0G2JN53 185 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 CCDC151A5D8V7 595 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 C4orf51C9J302 202 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 PLIN3O60664 434 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 B4GALT2O60909 372 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 CDC123O75794 336 aaPredicted RBP13.6□□□□□ -0.23
ABCF3-211ENST00000475728 SCELO95171 688 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 PROCP04070 461 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 SSR2P43308 183 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 ASPHQ12797 758 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 EXT1Q16394 746 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 AGAP7PQ5VUJ5 663 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 OR4C11Q6IEV9 310 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 ANKRD37Q7Z713 158 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 TRABD2AQ86V40 505 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 ZNF595Q8IYB9 648 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 WDR20Q8TBZ3 569 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 THOC3Q96J01 351 aaKnown RBP13.6□□□□□ -0.23
ABCF3-211ENST00000475728 PTCHD1Q96NR3 888 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 AGAP4Q96P64 663 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 ZNF382Q96SR6 550 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 LPAR4Q99677 370 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 NUDT9Q9BW91 350 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 RBCK1Q9BYM8 510 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 PRDM9Q9NQV7 894 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 PRDM7Q9NQW5 492 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 NMRK1Q9NWW6 199 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 AHSPQ9NZD4 102 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 SENP1Q9P0U3 644 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 TRPS1Q9UHF7 1281 aa13.6□□□□□ -0.23
ABCF3-211ENST00000475728 SEMA3DO95025 777 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 KRT6AP02538 564 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 KRT6BP04259 564 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 CPA3P15088 417 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 HIST1H1TP22492 207 aaPredicted RBP13.59□□□□□ -0.23
ABCF3-211ENST00000475728 ATP5A1P25705 553 aaKnown RBP13.59□□□□□ -0.23
ABCF3-211ENST00000475728 CERS1P27544 350 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 KRT6CP48668 564 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 CDH13P55290 713 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 PKNOX1P55347 436 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 HSD17B7P56937 341 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 OR4D2P58180 307 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 DNAJB13P59910 316 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 RPS13P62277 151 aaKnown RBP13.59□□□□□ -0.23
ABCF3-211ENST00000475728 LCP2Q13094 533 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 RUNX2Q13950 521 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 PCOLCEQ15113 449 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 UNC50Q53HI1 259 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 CFAP157Q5JU67 520 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 ATG14Q6ZNE5 492 aa13.59□□□□□ -0.23
ABCF3-211ENST00000475728 GPRIN3Q6ZVF9 776 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms