RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 GRHL1Q9NZI5 618 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 KCMF1Q9P0J7 381 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 CTNNAL1Q9UBT7 734 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 PYCARDQ9ULZ3 195 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 DYRK1BQ9Y463 629 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 SAR1BQ9Y6B6 198 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 NUP210LQ5VU65 1888 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 CACNA1DQ01668 2161 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 A0A0G2JMM0 328 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 TRBV11-1A0A0K0K1C0 115 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 A0A1W2PPB8 328 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 A0A1W2PRS3 328 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 TCRBV9S1A1TA0A576 114 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 PINLYPA6NC86 204 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 EFCAB8A8MWE9 144 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 KIR3DP1A8MWS1 328 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 CCDC188H7C350 402 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 CDK2AP1O14519 115 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 ERI3O43414 337 aaKnown RBP6.54□□□□□ -1.36
HDAC3-207ENST00000475549 CLEC3AO75596 197 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 FAM155BO75949 473 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 CCDC166P0CW27 439 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 GNAZP19086 355 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 AGAP20933 346 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 CERS1P27544 350 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 LIM2P55344 173 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 HSD17B7P56937 341 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 TAS2R50P59544 299 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 KRTAP10-9P60411 292 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 GPR85P60893 370 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 POU4F1Q01851 419 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 RBPJQ06330 500 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 DLG1Q12959 904 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 DOC2AQ14183 400 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 E2F2Q14209 437 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 ZKSCAN8Q15776 578 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-207ENST00000475549 EMC4Q5J8M3 183 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 XKRXQ6PP77 449 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF793Q6ZN11 406 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 CYS1Q717R9 158 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 CLNKQ7Z7G1 428 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 ISCA2Q86U28 154 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 TBC1D19Q8N5T2 526 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 HORMAD2Q8N7B1 307 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 ZFP62Q8NB50 900 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-207ENST00000475549 ACBD4Q8NC06 268 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 OR2L5Q8NG80 312 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 OR52N2Q8NGI0 321 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 SREK1Q8WXA9 508 aaKnown RBP6.54□□□□□ -1.36
HDAC3-207ENST00000475549 NCLNQ969V3 563 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 GAL3ST3Q96A11 431 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 WDR34Q96EX3 536 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 F2RL3Q96RI0 385 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 EGFL8Q99944 293 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 ERP44Q9BS26 406 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 NPLQ9BXD5 320 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-207ENST00000475549 DEFB126Q9BYW3 111 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 REXO4Q9GZR2 422 aaKnown RBP6.54□□□□□ -1.36
HDAC3-207ENST00000475549 NT5DC2Q9H857 520 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 POPDC3Q9HBV1 291 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 PNO1Q9NRX1 252 aaKnown RBP6.54□□□□□ -1.36
HDAC3-207ENST00000475549 PTBP2Q9UKA9 531 aaKnown RBP6.54□□□□□ -1.36
HDAC3-207ENST00000475549 DAPP1Q9UN19 280 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 MMACHCQ9Y4U1 282 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 HEATR5BQ9P2D3 2071 aa6.54□□□□□ -1.36
HDAC3-207ENST00000475549 TEP1Q99973 2627 aaKnown RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 POLQO75417 2590 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 A0A1B0GTH9 108 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 HMX2A2RU54 273 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 PABPN1LA6NDY0 278 aaKnown RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 URADA6NGE7 173 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 FAM159BA6NKW6 160 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 WASHC1A8K0Z3 465 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 PSMD12O00232 456 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 RTCAO00442 366 aaKnown RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 RAD51CO43502 376 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 PEX1O43933 1283 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 HS6ST1O60243 411 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 CTNSO60931 367 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 H2AFYO75367 372 aaKnown RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 ITGA10O75578 1167 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 STK16O75716 305 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 OR2J2O76002 312 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 PDE9AO76083 593 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 OR6B1O95007 311 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 ESRRAP11474 423 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 MTHFD2P13995 350 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF24P17028 368 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 HSPA7P48741 367 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 MEOX1P50221 254 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 CLCN2P51788 898 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 RAB38P57729 211 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 STXBP1P61764 594 aaKnown RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 SKP1P63208 163 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 GUCY2DQ02846 1103 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 TERF2Q15554 542 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 CMPK2Q5EBM0 449 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 CDKL4Q5MAI5 379 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 SULT1C3Q6IMI6 304 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 MTFR2Q6P444 385 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms