RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 UTP23Q9BRU9 249 aaKnown RBP14.24□□□□□ -0.13
VARS-223ENST00000474643 RNF32Q9H0A6 362 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 ZNF358Q9NW07 568 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 GPRC5BQ9NZH0 403 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 CNTRLQ7Z7A1 2325 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 UQCRHLA0A096LP55 91 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 TRGV8A0A0C4DH27 118 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 FAM227AF5H4B4 570 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 K7EPI3 171 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 B4GALT2O60909 372 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 CDH16O75309 829 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 UNC5CO95185 931 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 CLDN1O95832 211 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 SHBGP04278 402 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 FHP07954 510 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 ZNF888P0CJ79 500 aaPredicted RBP14.23□□□□□ -0.13
VARS-223ENST00000474643 KRT15P19012 456 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 ARL1P40616 181 aaPredicted RBP14.23□□□□□ -0.13
VARS-223ENST00000474643 HNF4AP41235 474 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 MAGEA12P43365 314 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 KCNK10P57789 538 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 IRF8Q02556 426 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 IFFO1Q0D2I5 559 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 SLBPQ14493 270 aaKnown RBP eCLIP14.23□□□□□ -0.13
VARS-223ENST00000474643 HIST2H2ACQ16777 129 aaPredicted RBP14.23□□□□□ -0.13
VARS-223ENST00000474643 MEP1AQ16819 746 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 ZNF766Q5HY98 468 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 TECRLQ5HYJ1 363 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 FCRLBQ6BAA4 426 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 ZNF787Q6DD87 383 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 HIST2H2AA3Q6FI13 130 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 PDSS2Q86YH6 399 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 TRPV3Q8NET8 790 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 TM4SF19Q96DZ7 209 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 IMMP1LQ96LU5 166 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 SPNS1Q9H2V7 528 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 RHBGQ9H310 441 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 VIPAS39Q9H9C1 493 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 SEC14L3Q9UDX4 400 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 ZFP69BQ9UJL9 534 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 HIVEP3Q5T1R4 2406 aa14.23□□□□□ -0.13
VARS-223ENST00000474643 TLDC2A0PJX2 215 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 OR2W5A6NFC9 320 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 GOLGA8RI6L899 631 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 CD46P15529 392 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 EPB42P16452 691 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 AHRP35869 848 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 SCTRP47872 440 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 ALDH18A1P54886 795 aaKnown RBP14.22□□□□□ -0.13
VARS-223ENST00000474643 OLR1P78380 273 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 PAGE2BQ5JRK9 111 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 ACER2Q5QJU3 275 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 TIFABQ6ZNK6 161 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 SLCO4C1Q6ZQN7 724 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 MYLK4Q86YV6 388 aaPredicted RBP14.22□□□□□ -0.13
VARS-223ENST00000474643 BEST3Q8N1M1 668 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 TEX9Q8N6V9 391 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 FAM98AQ8NCA5 519 aaKnown RBP14.22□□□□□ -0.13
VARS-223ENST00000474643 TTLQ8NG68 377 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 OR5T3Q8NGG3 340 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 DNAJB8Q8NHS0 232 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 PHF21BQ96EK2 531 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 FAR2Q96K12 515 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 GPR78Q96P69 363 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 KLHL1Q9NR64 748 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 ANKRD10Q9NXR5 420 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 XPR1Q9UBH6 696 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 SH3BGRL2Q9UJC5 107 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 TMCO1Q9UM00 188 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 TNPO3Q9Y5L0 923 aaKnown RBP14.22□□□□□ -0.13
VARS-223ENST00000474643 SCN2AQ99250 2005 aa14.22□□□□□ -0.13
VARS-223ENST00000474643 A0A088AWK7 358 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 WIPF3A6NGB9 483 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 ANKDD1BA6NHY2 528 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 MAGEB17A8MXT2 336 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 PRMT3O60678 531 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 GALR3O60755 368 aaPredicted RBP14.21□□□□□ -0.13
VARS-223ENST00000474643 ZG16O60844 167 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 PYGBP11216 843 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 ZNF10P21506 573 aaPredicted RBP14.21□□□□□ -0.13
VARS-223ENST00000474643 EEF1DP29692 281 aaKnown RBP14.21□□□□□ -0.13
VARS-223ENST00000474643 DCTP40126 519 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 RAB8AP61006 207 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 CHIT1Q13231 466 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 LAPTM5Q13571 262 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 SETDB1Q15047 1291 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 TMIGD1Q6UXZ0 262 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 HDXQ7Z353 690 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 PTGR2Q8N8N7 351 aaPredicted RBP14.21□□□□□ -0.13
VARS-223ENST00000474643 TMEM178AQ8NBL3 297 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 M1APQ8TC57 530 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 EPS8L3Q8TE67 593 aaKnown RBP14.21□□□□□ -0.13
VARS-223ENST00000474643 UBTD2Q8WUN7 234 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 TSLPQ969D9 159 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 ATP6V1E2Q96A05 226 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 MOCOSQ96EN8 888 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 PTCD3Q96EY7 689 aaKnown RBP14.21□□□□□ -0.13
VARS-223ENST00000474643 MAGED4Q96JG8 741 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 PTCHD1Q96NR3 888 aa14.21□□□□□ -0.13
VARS-223ENST00000474643 MRPL57Q9BQC6 102 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms