RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 PHF11Q9UIL8 331 aa7.91□□□□□ -1.14
CNN3-205ENST00000474409 SATB2Q9UPW6 733 aa7.91□□□□□ -1.14
CNN3-205ENST00000474409 DLGAP4Q9Y2H0 992 aa7.91□□□□□ -1.14
CNN3-205ENST00000474409 COPG1Q9Y678 874 aaKnown RBP7.91□□□□□ -1.14
CNN3-205ENST00000474409 SPACA6W5XKT8 324 aa7.91□□□□□ -1.14
CNN3-205ENST00000474409 NINQ8N4C6 2090 aa7.91□□□□□ -1.14
CNN3-205ENST00000474409 DOCK10Q96BY6 2186 aa7.91□□□□□ -1.14
CNN3-205ENST00000474409 DCDC2BA2VCK2 349 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 FAM149AA5PLN7 773 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 H3BMH7 237 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 SGK494L7N484 410 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 FCHO1O14526 889 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 TMPRSS11DO60235 418 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 GUCY1B2O75343 617 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 LRATO95237 230 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 MED26O95402 600 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 TIAF1O95411 115 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 IL3P08700 152 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 FAM58BPP0C7Q3 252 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 SMIM10L1P0DMW3 83 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 NR2F6P10588 404 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 BCKDHAP12694 445 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 FBLP22087 321 aaKnown RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 CPN2P22792 545 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 ETV5P41161 510 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 BUD31P41223 144 aaPredicted RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 GSTM5P46439 218 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 ATP4BP51164 291 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 CLNS1AP54105 237 aaKnown RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 HNRNPH2P55795 449 aaKnown RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 TAS2R50P59544 299 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 IRX1P78414 480 aaPredicted RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 SHC2P98077 582 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 TNFRSF17Q02223 184 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 GABPB1Q06547 395 aaPredicted RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 TARDBPQ13148 414 aaKnown RBP eCLIP7.9□□□□□ -1.14
CNN3-205ENST00000474409 SLAMF1Q13291 335 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 FAM53BQ14153 422 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 UBAP2LQ14157 1087 aaKnown RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 KIAA0040Q15053 153 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 PDCD4Q53EL6 469 aaKnown RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 ARHGAP40Q5TG30 622 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 TMEM164Q5U3C3 297 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 C1orf189Q5VU69 101 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 PWWP2BQ6NUJ5 590 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 PRMT9Q6P2P2 845 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 GALNT18Q6P9A2 607 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 IKBIPQ70UQ0 350 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 UBE3DQ7Z6J8 389 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 MTDHQ86UE4 582 aaKnown RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 PDSS2Q86YH6 399 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 DTWD1Q8N5C7 304 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 ACOT4Q8N9L9 421 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 PROKR1Q8TCW9 393 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 STARD8Q92502 1023 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 GFM2Q969S9 779 aaKnown RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 PMEPA1Q969W9 287 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 COL26A1Q96A83 441 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 ERP27Q96DN0 273 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 SMIM10Q96HG1 83 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 LRRC37BQ96QE4 947 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 FAIM2Q9BWQ8 316 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 RBCK1Q9BYM8 510 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 DPY30Q9C005 99 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 BRINP2Q9C0B6 783 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 DDX31Q9H8H2 851 aaKnown RBP7.9□□□□□ -1.14
CNN3-205ENST00000474409 WDR41Q9HAD4 459 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 MYNNQ9NPC7 610 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 MIEF1Q9NQG6 463 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 PRDM7Q9NQW5 492 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 FBXO8Q9NRD0 319 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 HCN3Q9P1Z3 774 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 ARMCX1Q9P291 453 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 FBXW2Q9UKT8 454 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 CDC14AQ9UNH5 594 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 PCDHB3Q9Y5E6 796 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 CAPN7Q9Y6W3 813 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 MAU2Q9Y6X3 613 aa7.9□□□□□ -1.14
CNN3-205ENST00000474409 CPAMD8Q8IZJ3 1885 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 PMS2P1A4D2B8 440 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 H0YIG0 161 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 PSMD12O00232 456 aaPredicted RBP7.89□□□□□ -1.15
CNN3-205ENST00000474409 NR5A2O00482 541 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 AKAP10O43572 662 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 FOXS1O43638 330 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 KIAA0754O94854 1291 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 NTRK1P04629 796 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 RNH1P13489 461 aaKnown RBP7.89□□□□□ -1.15
CNN3-205ENST00000474409 COX7A2P14406 83 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 PCSK2P16519 638 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 DDX5P17844 614 aaKnown RBP7.89□□□□□ -1.15
CNN3-205ENST00000474409 TACR1P25103 407 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 TLX1P31314 330 aaPredicted RBP7.89□□□□□ -1.15
CNN3-205ENST00000474409 RPL3P39023 403 aaKnown RBP7.89□□□□□ -1.15
CNN3-205ENST00000474409 PLA2G5P39877 138 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 ALDH9A1P49189 494 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 LIM2P55344 173 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 RAB38P57729 211 aa7.89□□□□□ -1.15
CNN3-205ENST00000474409 TRA2BP62995 288 aaKnown RBP7.89□□□□□ -1.15
CNN3-205ENST00000474409 SNRPNP63162 240 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms