RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 NAA30Q147X3 362 aaPredicted RBP10.49□□□□□ -0.73
CKS1B-206ENST00000474215 TMEM35AQ53FP2 167 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 FCRLBQ6BAA4 426 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 CHSY3Q70JA7 882 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 PLD6Q8N2A8 252 aaKnown RBP10.49□□□□□ -0.73
CKS1B-206ENST00000474215 SRFBP1Q8NEF9 429 aaKnown RBP10.49□□□□□ -0.73
CKS1B-206ENST00000474215 OR7G3Q8NG95 312 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 SUN3Q8TAQ9 357 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 UHMK1Q8TAS1 419 aaKnown RBP10.49□□□□□ -0.73
CKS1B-206ENST00000474215 ADAMTS18Q8TE60 1221 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF473Q8WTR7 871 aaKnown RBP10.49□□□□□ -0.73
CKS1B-206ENST00000474215 DCAKDQ8WVC6 231 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 FAR1Q8WVX9 515 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 ISL2Q96A47 359 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 KCNC2Q96PR1 638 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 PAFAH2Q99487 392 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 TBCDQ9BTW9 1192 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 ROGDIQ9GZN7 287 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF180Q9UJW8 692 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 MMACHCQ9Y4U1 282 aa10.49□□□□□ -0.73
CKS1B-206ENST00000474215 TNPO3Q9Y5L0 923 aaKnown RBP10.49□□□□□ -0.73
CKS1B-206ENST00000474215 UTP20O75691 2785 aaKnown RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 CYR61O00622 381 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 PRAMEF2O60811 474 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 SEMA7AO75326 666 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 TGFB1P01137 390 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 RBP1P09455 135 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 PCNAP12004 261 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 COL6A2P12110 1019 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 MAGEA12P43365 314 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 LIM2P55344 173 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 TAS2R50P59544 299 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 ELOAQ14241 798 aaKnown RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 RCN2Q14257 317 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 PCBP2Q15366 365 aaKnown RBP eCLIP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 MEP1AQ16819 746 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 LIPJQ5W064 366 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 GRHL2Q6ISB3 625 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 METTL2BQ6P1Q9 378 aaKnown RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 FAM180AQ6UWF9 173 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 TRMT10CQ7L0Y3 403 aaKnown RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 UBE3DQ7Z6J8 389 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 CRLF3Q8IUI8 442 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 SCUBE1Q8IWY4 988 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF595Q8IYB9 648 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 BEST3Q8N1M1 668 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 SLC5A8Q8N695 610 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 ST6GALNAC3Q8NDV1 305 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 NFAM1Q8NET5 270 aaPredicted RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 ELP5Q8TE02 316 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 CMTM7Q96FZ5 175 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 MS4A8Q9BY19 250 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 IPPKQ9H8X2 491 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 COPS7BQ9H9Q2 264 aaPredicted RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 PRM3Q9NNZ6 103 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 ZNF358Q9NW07 568 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 KCMF1Q9P0J7 381 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 ABI3Q9P2A4 366 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 CPSF2Q9P2I0 782 aaKnown RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 ADGRE2Q9UHX3 823 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 DAPP1Q9UN19 280 aa10.48□□□□□ -0.73
CKS1B-206ENST00000474215 MRPS33Q9Y291 106 aaKnown RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 SPENQ96T58 3664 aaKnown RBP10.48□□□□□ -0.73
CKS1B-206ENST00000474215 LRRK2Q5S007 2527 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 LRRC14BA6NHZ5 514 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 SAGE2PA6NJ88 616 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 A8MUA0 341 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 TRIM49D1C9J1S8 452 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 CTNSO60931 367 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 RHOXF2BP0C7M4 288 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 EDN3P14138 238 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 ATP5A1P25705 553 aaKnown RBP10.47□□□□□ -0.73
CKS1B-206ENST00000474215 CERS1P27544 350 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 CD96P40200 585 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 PIK3CBP42338 1070 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 PIK3CGP48736 1102 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 SLC13A2Q13183 592 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 TUBA3CQ13748 450 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 GTF2H2Q13888 395 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 INAQ16352 499 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 TSNAXIP1Q2TAA8 658 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 AP5B1Q2VPB7 878 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 TECRLQ5HYJ1 363 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 DEPDC1Q5TB30 811 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 LGSNQ5TDP6 509 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 KHDRBS2Q5VWX1 349 aaKnown RBP10.47□□□□□ -0.73
CKS1B-206ENST00000474215 GTF2H2CQ6P1K8 395 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 TUBA3EQ6PEY2 450 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 GOLGA7Q7Z5G4 137 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 RPS19BP1Q86WX3 136 aaKnown RBP10.47□□□□□ -0.73
CKS1B-206ENST00000474215 MYLK4Q86YV6 388 aaPredicted RBP10.47□□□□□ -0.73
CKS1B-206ENST00000474215 LGI4Q8N135 537 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 KIF2BQ8N4N8 673 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 BCORP1Q8N888 145 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 ACOT4Q8N9L9 421 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 FAM47BQ8NA70 645 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 TMEM52Q8NDY8 209 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 HUS1BQ8NHY5 278 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 SCYL1Q96KG9 808 aa10.47□□□□□ -0.73
CKS1B-206ENST00000474215 PSMG3-AS1Q96PY0 264 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms