RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 A0A1W2PPM1 405 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 A0A1W2PQ72 361 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 A8MT66 165 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 SAP18O00422 153 aaKnown RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 MAOAP21397 527 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 PTX3P26022 381 aaPredicted RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 CERS1P27544 350 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 SSR2P43308 183 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 EFNA3P52797 238 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 RAB38P57729 211 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 SLC13A2Q13183 592 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 ZRSR2Q15696 482 aaKnown RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 EXT1Q16394 746 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 KHDRBS2Q5VWX1 349 aaKnown RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 PAPD4Q6PIY7 484 aaKnown RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 IGFL3Q6UXB1 125 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 QSOX2Q6ZRP7 698 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 MILR1Q7Z6M3 343 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 EFCAB3Q8N7B9 438 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 RBMXL3Q8N7X1 1067 aaKnown RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 BRIX1Q8TDN6 353 aaKnown RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 EPS8L3Q8TE67 593 aaKnown RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 PNPLA2Q96AD5 504 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 MTFMTQ96DP5 389 aaKnown RBP13.37□□□□□ -0.27
VAMP4-203ENST00000474047 CNDP1Q96KN2 507 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 QRFPRQ96P65 431 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 CDK15Q96Q40 435 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 PRTFDC1Q9NRG1 225 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
VAMP4-203ENST00000474047 DYTNA2CJ06 578 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 A8MUI8 341 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 H0YIV9 168 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 OR7A17O14581 309 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 CDH16O75309 829 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 GLRA3O75311 464 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 SUPT7LO94864 414 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 OTCP00480 354 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 CELA2AP08217 269 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ATP5F1P24539 256 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-203ENST00000474047 CCT5P48643 541 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 MLLT10P55197 1068 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 IFT88Q13099 833 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 DEPDC1Q5TB30 811 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 SLC6A19Q695T7 634 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 TDRPQ86YL5 185 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 SLC22A9Q8IVM8 553 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 L3MBTL4Q8NA19 623 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 FAM47BQ8NA70 645 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 DNAJB14Q8TBM8 379 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 IMMP1LQ96LU5 166 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 NSUN5Q96P11 429 aaKnown RBP13.36□□□□□ -0.27
VAMP4-203ENST00000474047 LMF1Q96S06 567 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 NTMT1Q9BV86 223 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 KCNK13Q9HB14 408 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ZBTB20Q9HC78 741 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-203ENST00000474047 DMRT3Q9NQL9 472 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 PRDM7Q9NQW5 492 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 B3GNT3Q9Y2A9 372 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 MMACHCQ9Y4U1 282 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 A8MUA0 341 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 RTCAO00442 366 aaKnown RBP13.36□□□□□ -0.27
VAMP4-203ENST00000474047 TBX6O95947 436 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ITGAMP11215 1152 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ATP5A1P25705 553 aaKnown RBP13.36□□□□□ -0.27
VAMP4-203ENST00000474047 NEK2P51955 445 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 LIM2P55344 173 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 RPS13P62277 151 aaKnown RBP13.36□□□□□ -0.27
VAMP4-203ENST00000474047 HERVK_113P63132 956 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ARG2P78540 354 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 MFAP5Q13361 173 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ERCC6LQ2NKX8 1250 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ABHD17BQ5VST6 288 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 PLAG1Q6DJT9 500 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 OR4C11Q6IEV9 310 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 WDR93Q6P2C0 686 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 EMBQ6PCB8 327 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ZNF595Q8IYB9 648 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 RNF175Q8N4F7 328 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ACOT4Q8N9L9 421 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 CCDC63Q8NA47 563 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 OR52B6Q8NGF0 335 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 WDR77Q9BQA1 342 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ERVK-6Q9BXR3 956 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 ELOVL6Q9H5J4 265 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 DAPP1Q9UN19 280 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 CFAP46Q8IYW2 2715 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 BOD1L1Q8NFC6 3051 aa13.36□□□□□ -0.27
VAMP4-203ENST00000474047 SETXQ7Z333 2677 aaKnown RBP13.35□□□□□ -0.27
VAMP4-203ENST00000474047 FOXO6A8MYZ6 492 aa13.35□□□□□ -0.27
VAMP4-203ENST00000474047 DLX3O60479 287 aa13.35□□□□□ -0.27
VAMP4-203ENST00000474047 SBK3P0C264 359 aa13.35□□□□□ -0.27
VAMP4-203ENST00000474047 TSPAN8P19075 237 aa13.35□□□□□ -0.27
VAMP4-203ENST00000474047 HIST1H1TP22492 207 aaPredicted RBP13.35□□□□□ -0.27
VAMP4-203ENST00000474047 CD97P48960 835 aa13.35□□□□□ -0.27
VAMP4-203ENST00000474047 CDH13P55290 713 aa13.35□□□□□ -0.27
VAMP4-203ENST00000474047 HSD17B7P56937 341 aa13.35□□□□□ -0.27
VAMP4-203ENST00000474047 TAS2R50P59544 299 aa13.35□□□□□ -0.27
VAMP4-203ENST00000474047 PLEKHN1Q494U1 663 aaPredicted RBP13.35□□□□□ -0.27
VAMP4-203ENST00000474047 SGO1Q5FBB7 561 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms