RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CEP104O60308 925 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 WDR1O75083 606 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 OR6B1O95007 311 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 FTCDO95954 541 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 RAF1P04049 648 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 HEXAP06865 529 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 F7P08709 466 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 INHBBP09529 407 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ZSCAN5DPP0CG00 497 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF888P0CJ79 500 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 MPC1LP0DKB6 136 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ENO3P13929 434 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF16P17020 682 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 MGAT1P26572 445 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 RPL22P35268 128 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 GRK3P35626 688 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CYLC1P35663 651 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ANP32AP39687 249 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 MAGEA5P43359 124 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 NPY2RP49146 381 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 SSR4P51571 173 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CLCN2P51788 898 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 GPR143P51810 404 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 SKP1P63208 163 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 PLGLB1Q02325 96 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 RGS1Q08116 209 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 FOXO1Q12778 655 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 HYAL2Q12891 473 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 NAE1Q13564 534 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 PWP1Q13610 501 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 TERF2Q15554 542 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 DEFB113Q30KQ7 82 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 C1orf185Q5T7R7 199 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 RIPPLY2Q5TAB7 128 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 TMEM198Q66K66 360 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF470Q6ECI4 717 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 KIAA0930Q6ICG6 404 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 NEPROQ6NW34 567 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF585AQ6P3V2 769 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF549Q6P9A3 640 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 AGTRAPQ6RW13 159 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CLEC9AQ6UXN8 241 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CYHR1Q6ZMK1 362 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 C16orf47Q6ZP98 133 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 RGS9BPQ6ZS82 235 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 TRILQ7L0X0 811 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 PEX26Q7Z412 305 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 WDR53Q7Z5U6 358 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 STRA8Q7Z7C7 330 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CTAGE6Q86UF2 777 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC22A16Q86VW1 577 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 GPALPP1Q8IXQ4 340 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CPNE9Q8IYJ1 553 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 TMEM251Q8N6I4 163 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 UBL4BQ8N7F7 174 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CCDC89Q8N998 374 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 RELL2Q8NC24 303 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ABHD11Q8NFV4 315 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 OR4K1Q8NGD4 311 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 GOT1L1Q8NHS2 421 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CD200R1Q8TD46 325 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 FAM222BQ8WU58 562 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 C1orf54Q8WWF1 131 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 C18orf12Q96KH6 178 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 SH3GL2Q99962 352 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 FRMD8P1Q9BZ68 369 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ATG10Q9H0Y0 220 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 NECTIN3Q9NQS3 549 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 INTS10Q9NVR2 710 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 BFARQ9NZS9 450 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ZFATQ9P243 1243 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 B4GALT7Q9UBV7 327 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 FBXW2Q9UKT8 454 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 SOX13Q9UN79 622 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 PPIEQ9UNP9 301 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ERVK-11Q9UQG0 969 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF148Q9UQR1 794 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 DRG1Q9Y295 367 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 YARS2Q9Y2Z4 477 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 DHRS7Q9Y394 339 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CLDN16Q9Y5I7 305 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 EPN1Q9Y6I3 576 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 RTTNQ86VV8 2226 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 MPDZO75970 2070 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ARID1AO14497 2285 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 TCRBV7S3A2A0A539 114 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 TRBC2A0A5B9 178 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 A8MVJ9 347 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 C4orf51C9J302 202 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 FAM47E-STBD1D6RA91 191 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 G3V3Y1 287 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 TGFBR3LH3BV60 316 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 AP3B1O00203 1094 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 PSMD12O00232 456 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 EIF3FO00303 357 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SYT5O00445 386 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 OR1F1O43749 312 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SUSD5O60279 629 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 OR2J2O76002 312 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ZFAND5O76080 213 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms