RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 SYNDIG1LA6NDD5 238 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 NPIPB8E9PQR5 432 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 CNOT3O75175 753 aaKnown RBP18.88■□□□□ 0.61
SF1-213ENST00000472725 BGNP21810 368 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 XCR1P46094 333 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 SLC1A6P48664 564 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 ABRAXAS2Q15018 415 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 UGT8Q16880 541 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 TUBB8Q3ZCM7 444 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 NUDT13Q86X67 352 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 RAB43Q86YS6 212 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 ZC3H7AQ8IWR0 971 aaKnown RBP18.88■□□□□ 0.61
SF1-213ENST00000472725 METTL4Q8N3J2 472 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 RNF175Q8N4F7 328 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 ACOT4Q8N9L9 421 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 C7orf57Q8NEG2 295 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 TBC1D20Q96BZ9 403 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 CATSPER2Q96P56 530 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 ILKAPQ9H0C8 392 aaPredicted RBP18.88■□□□□ 0.61
SF1-213ENST00000472725 THAP1Q9NVV9 213 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 HCN3Q9P1Z3 774 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 DAPP1Q9UN19 280 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 RAP2CQ9Y3L5 183 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 SPACA6W5XKT8 324 aa18.88■□□□□ 0.61
SF1-213ENST00000472725 FRYQ5TBA9 3013 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 PSMD12O00232 456 aaPredicted RBP18.87■□□□□ 0.61
SF1-213ENST00000472725 SLC28A1O00337 649 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 ETHE1O95571 254 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 ITPKBP27987 946 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 BSGP35613 385 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 RAB38P57729 211 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 MAT1AQ00266 395 aaKnown RBP18.87■□□□□ 0.61
SF1-213ENST00000472725 ST3GAL2Q16842 350 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 SPIN4Q56A73 249 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 VWA2Q5GFL6 755 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 TCHHL1Q5QJ38 904 aaPredicted RBP18.87■□□□□ 0.61
SF1-213ENST00000472725 SH2D4BQ5SQS7 431 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 NUP210LQ5VU65 1888 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 CA13Q8N1Q1 262 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 ARFGAP2Q8N6H7 521 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 THAP4Q8WY91 577 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 ZNF717Q9BY31 904 aaPredicted RBP18.87■□□□□ 0.61
SF1-213ENST00000472725 SHCBP1LQ9BZQ2 653 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 MANSC1Q9H8J5 431 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 TNFRSF12AQ9NP84 129 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 LYARQ9NX58 379 aaKnown RBP18.87■□□□□ 0.61
SF1-213ENST00000472725 SIRT5Q9NXA8 310 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 PHF11Q9UIL8 331 aa18.87■□□□□ 0.61
SF1-213ENST00000472725 MRPS33Q9Y291 106 aaKnown RBP18.87■□□□□ 0.61
SF1-213ENST00000472725 ZNF860A6NHJ4 632 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 RSL1D1O76021 490 aaKnown RBP18.86■□□□□ 0.61
SF1-213ENST00000472725 B3GALT4O96024 378 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 FHP07954 510 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 NR1D1P20393 614 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 PRPH2P23942 346 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 MMP11P24347 488 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 CERS1P27544 350 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 ARRB2P32121 409 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 HTR6P50406 440 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 LIM2P55344 173 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 KLC1Q07866 573 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 BST1Q10588 318 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 SRSF6Q13247 344 aaKnown RBP18.86■□□□□ 0.61
SF1-213ENST00000472725 RUNX2Q13950 521 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 SYT16Q17RD7 645 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 UGT3A2Q3SY77 523 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 CLEC6AQ6EIG7 209 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 ZNF793Q6ZN11 406 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 OR5T3Q8NGG3 340 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 ADAMTS17Q8TE56 1095 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 CHTF18Q8WVB6 975 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 PEX11GQ96HA9 241 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 CRB3Q9BUF7 120 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 ACPTQ9BZG2 426 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 INTS9Q9NV88 658 aaKnown RBP18.86■□□□□ 0.61
SF1-213ENST00000472725 DNAJC15Q9Y5T4 150 aa18.86■□□□□ 0.61
SF1-213ENST00000472725 A0A0A6YYD5 115 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 A0A0G2JN53 185 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 SAP18O00422 153 aaKnown RBP18.85■□□□□ 0.61
SF1-213ENST00000472725 RTCAO00442 366 aaKnown RBP18.85■□□□□ 0.61
SF1-213ENST00000472725 RGS14O43566 566 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 SNNO75324 88 aaPredicted RBP18.85■□□□□ 0.61
SF1-213ENST00000472725 SH3BGRLO75368 114 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 UMODP07911 640 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 CHN1P15882 459 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 WT1P19544 449 aaPredicted RBP18.85■□□□□ 0.61
SF1-213ENST00000472725 SERPINB3P29508 390 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 GSTM5P46439 218 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 EMP2P54851 167 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 RPS18P62269 152 aaKnown RBP18.85■□□□□ 0.61
SF1-213ENST00000472725 TBL3Q12788 808 aaKnown RBP18.85■□□□□ 0.61
SF1-213ENST00000472725 CDC20Q12834 499 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 IMPG1Q17R60 797 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 CES4AQ5XG92 561 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 MRM1Q6IN84 353 aaKnown RBP18.85■□□□□ 0.61
SF1-213ENST00000472725 CYP20A1Q6UW02 462 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 PLPP5Q8NEB5 264 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 FAM76AQ8TAV0 307 aa18.85■□□□□ 0.61
SF1-213ENST00000472725 MRPL1Q9BYD6 325 aaKnown RBP18.85■□□□□ 0.61
SF1-213ENST00000472725 SOX17Q9H6I2 414 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms