RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 ANGPT2O15123 496 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 MPPED1O15442 326 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 B4GAT1O43505 415 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 HEXIM1O94992 359 aaKnown RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ONECUT2O95948 504 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 TNNC2P02585 160 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 CTSLP07711 333 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 RHOXF2BP0C7M4 288 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ACP5P13686 325 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 CD1EP15812 388 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 SOX6P35712 828 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 PCP4P48539 62 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 PFN3P60673 137 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 TRA2BP62995 288 aaKnown RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 TNNC1P63316 161 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ELP6Q0PNE2 266 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 FOXF2Q12947 444 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ORC2Q13416 577 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 FRG1Q14331 258 aaKnown RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 C14orf28Q4W4Y0 310 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 FAM46CQ5VWP2 391 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 KIAA0930Q6ICG6 404 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ZNF517Q6ZMY9 492 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 RBM43Q6ZSC3 357 aaKnown RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ZNF720Q7Z2F6 126 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 GPBP1Q86WP2 473 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 FSTL5Q8N475 847 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 WASF1Q92558 559 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ITFG2Q969R8 447 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 TMEM125Q96AQ2 219 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 RNFT2Q96EX2 444 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ALG14Q96F25 216 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 PRICKLE1Q96MT3 831 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 GDAP1L1Q96MZ0 367 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 FAM210AQ96ND0 272 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 KLHL32Q96NJ5 620 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 KLF6Q99612 283 aaPredicted RBP6.51□□□□□ -1.37
SCAF4-205ENST00000472318 RHOXF2Q9BQY4 288 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 ERP44Q9BS26 406 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 EFHD1Q9BUP0 239 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 STRA6Q9BX79 667 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 SLC17A9Q9BYT1 436 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 RIBC2Q9H4K1 309 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 MLXIPLQ9NP71 852 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 RCE1Q9Y256 329 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 CSPG4Q6UVK1 2322 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 SMIM30A4D0T7 59 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 ANXA2P2A6NMY6 339 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 AVILO75366 819 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 E2F6O75461 281 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 CHEK2O96017 543 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 MMP2P08253 660 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 UROSP10746 265 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 ETS1P14921 441 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 PDGFRAP16234 1089 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 PSMA5P28066 241 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 PITPNBP48739 271 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 DIO1P49895 249 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 PGDP52209 483 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 NDST1P52848 882 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 MYL6P60660 151 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 RPS7P62081 194 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 RPS24P62847 133 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 B4GALNT1Q00973 533 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 CEBPZQ03701 1054 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 CSTF3Q12996 717 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 TMEM119Q4V9L6 283 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 UBAP2Q5T6F2 1119 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 MSANTD2Q6P1R3 559 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 ZYG11AQ6WRX3 759 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 PPP1R21Q6ZMI0 780 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 SCARA5Q6ZMJ2 495 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 KCTD9Q7L273 389 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 SFR1Q86XK3 245 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 CBWD2Q8IUF1 395 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 APLFQ8IW19 511 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 RBMXL3Q8N7X1 1067 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 TC2NQ8N9U0 490 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 NHLRC2Q8NBF2 726 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 LPCAT1Q8NF37 534 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 OR8D1Q8WZ84 308 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 NDRG1Q92597 394 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 THRSPQ92748 146 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 SCAMP4Q969E2 229 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 RTP4Q96DX8 246 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 DTNBP1Q96EV8 351 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 RBM14Q96PK6 669 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 PAFAH2Q99487 392 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 TIMP4Q99727 224 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 CTRCQ99895 268 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 SRSF8Q9BRL6 282 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 IMPG2Q9BZV3 1241 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 CRLF2Q9HC73 371 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 MRPL40Q9NQ50 206 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 IARS2Q9NSE4 1012 aaKnown RBP6.5□□□□□ -1.37
SCAF4-205ENST00000472318 SLC39A1Q9NY26 324 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 PSD3Q9NYI0 1048 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 COPG2Q9UBF2 871 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 TRPC4Q9UBN4 977 aa6.5□□□□□ -1.37
SCAF4-205ENST00000472318 MBD3L5A6NJ08 208 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms