RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 DNAJB8Q8NHS0 232 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 PDLIM2Q96JY6 352 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 GPR137Q96N19 417 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 OR1F2PQ96R84 312 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 LPAR4Q99677 370 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 NAPGQ99747 312 aaPredicted RBP7.54□□□□□ -1.2
USP48-207ENST00000471752 NAT9Q9BTE0 207 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 GPAMQ9HCL2 828 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 PRDM7Q9NQW5 492 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 KCMF1Q9P0J7 381 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 LRFN1Q9P244 771 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 TNFRSF10DQ9UBN6 386 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 C19orf25Q9UFG5 118 aaPredicted RBP7.54□□□□□ -1.2
USP48-207ENST00000471752 ENTPD4Q9Y227 616 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 DYRK1BQ9Y463 629 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 OARD1Q9Y530 152 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 ITPR3Q14573 2671 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 TRBV11-1A0A0K0K1C0 115 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 A0A1B0GUH1 482 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 A0A1W2PS29 197 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 TCRBV9S1A1TA0A576 114 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 HMX2A2RU54 273 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 SAGE2PA6NJ88 616 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 ERI3O43414 337 aaKnown RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 NME2P1O60361 137 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 PRKRAO75569 313 aaKnown RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 SLC25A12O75746 678 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 SERPINA6P08185 405 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 ENO2P09104 434 aaPredicted RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 RNH1P13489 461 aaKnown RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 NME2P22392 152 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 CCND1P24385 295 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 TNFRSF8P28908 595 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 LIM2P55344 173 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 IRF9Q00978 393 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 ALDH6A1Q02252 535 aaKnown RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 RGS1Q08116 209 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 CBLBQ13191 982 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 EXT1Q16394 746 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 ZNF750Q32MQ0 723 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 EMC4Q5J8M3 183 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 LRRC8EQ6NSJ5 796 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 ABHD17CQ6PCB6 329 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 TMIGD1Q6UXZ0 262 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 QSOX2Q6ZRP7 698 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 GPSM1Q86YR5 675 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 SPPL2CQ8IUH8 684 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 NKAPQ8N5F7 415 aaKnown RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 OR52N2Q8NGI0 321 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 PTPMT1Q8WUK0 201 aaPredicted RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 ATL1Q8WXF7 558 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 CCT6BQ92526 530 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 EXT2Q93063 718 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 NCLNQ969V3 563 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 MRRFQ96E11 262 aaKnown RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 UBXN10Q96LJ8 280 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 MAPKAP1Q9BPZ7 522 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 AIF1LQ9BQI0 150 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 ERP44Q9BS26 406 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 TRIM54Q9BYV2 358 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 DEFB126Q9BYW3 111 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 DEFB127Q9H1M4 99 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 RHOJQ9H4E5 214 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 SEMA4BQ9NPR2 832 aaPredicted RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 PRDM9Q9NQV7 894 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 IGSF5Q9NSI5 407 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 PTBP2Q9UKA9 531 aaKnown RBP7.53□□□□□ -1.2
USP48-207ENST00000471752 FBXW2Q9UKT8 454 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 KCNE2Q9Y6J6 123 aa7.53□□□□□ -1.2
USP48-207ENST00000471752 A0A1B0GTH9 108 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ESYT3A0FGR9 886 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 FAM159BA6NKW6 160 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 UBXN8O00124 270 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 WWP2O00308 870 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 HS6ST1O60243 411 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 LDB3O75112 727 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 OR6B1O95007 311 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ETHE1O95571 254 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 CRYABP02511 175 aaKnown RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 EEF1DP29692 281 aaKnown RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 TRHRP34981 398 aaPredicted RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 GGT5P36269 586 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 MEOX1P50221 254 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 HLCSP50747 726 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 PLTPP55058 493 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 CDKL1Q00532 357 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 SLC7A5Q01650 507 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 GUCY2DQ02846 1103 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 BMPR2Q13873 1038 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ZNF630Q2M218 657 aaPredicted RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 ADPRMQ3LIE5 342 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 KBTBD12Q3ZCT8 623 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 CMPK2Q5EBM0 449 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 Q6ZPB1 254 aaPredicted RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 C3orf62Q6ZUJ4 267 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 SYDE1Q6ZW31 735 aaPredicted RBP7.52□□□□□ -1.21
USP48-207ENST00000471752 ABHD13Q7L211 337 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 ISCA2Q86U28 154 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 SNX31Q8N9S9 440 aa7.52□□□□□ -1.21
USP48-207ENST00000471752 TRPV3Q8NET8 790 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms