RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 CLDN9O95484 217 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 TGFB1P01137 390 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 TUBBP07437 444 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 HEXBP07686 556 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 SFTPCP11686 197 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 PCNAP12004 261 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 COX6A1P12074 109 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 TSPAN8P19075 237 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 IMPDH1P20839 514 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 IL10P22301 178 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 PIK3CBP42338 1070 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 PLA2G16P53816 162 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 RRADP55042 308 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 ZRSR2Q15696 482 aaKnown RBP11.66□□□□□ -0.54
LINC00888-202ENST00000471496 CPSF6Q16630 551 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00888-202ENST00000471496 DEPDC1Q5TB30 811 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 FAAH2Q6GMR7 532 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 TCTN3Q6NUS6 607 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 NIPAL1Q6NVV3 410 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 LETMD1Q6P1Q0 360 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 ZNF793Q6ZN11 406 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 LANCL3Q6ZV70 420 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 IQCKQ8N0W5 287 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 OR4F6Q8NGB9 312 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 C9orf43Q8TAL5 461 aaPredicted RBP11.66□□□□□ -0.54
LINC00888-202ENST00000471496 TBC1D20Q96BZ9 403 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 L3HYPDHQ96EM0 354 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 FER1L6-AS2Q96M78 137 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 MTERF1Q99551 399 aaKnown RBP11.66□□□□□ -0.54
LINC00888-202ENST00000471496 NUDT9Q9BW91 350 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 DMRT3Q9NQL9 472 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 MKS1Q9NXB0 559 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 TP53TG5Q9Y2B4 290 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 PCDHGA9Q9Y5G4 932 aaKnown RBP11.66□□□□□ -0.54
LINC00888-202ENST00000471496 PCDHGA11Q9Y5H2 935 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
LINC00888-202ENST00000471496 IGHV1-45A0A0A0MS14 117 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 MAGEB17A8MXT2 336 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 FAM227AF5H4B4 570 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 MKRN2OSH3BPM6 223 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 RTCAO00442 366 aaKnown RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 SH3BGRLO75368 114 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 ETHE1O95571 254 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 CYC1P08574 325 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 ACPPP15309 386 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 CREB1P16220 341 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 TAC1P20366 129 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 SERPINB1P30740 379 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 GPC1P35052 558 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 RNF144AP50876 292 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 NEK2P51955 445 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 CCNG1P51959 295 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 SKP1P63208 163 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 CLCQ05315 142 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 ZNF844Q08AG5 666 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 IFFO1Q0D2I5 559 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 PCOLCEQ15113 449 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 TUBB8Q3ZCM7 444 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 GGTA1PQ4G0N0 100 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 KHDRBS2Q5VWX1 349 aaKnown RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 TRIM40Q6P9F5 258 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 ZYG11AQ6WRX3 759 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 MYLK4Q86YV6 388 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 BANPQ8N9N5 519 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 PLPP5Q8NEB5 264 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 WDR77Q9BQA1 342 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 NPLQ9BXD5 320 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 ZNF717Q9BY31 904 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 OR51B5Q9H339 312 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 GSTO2Q9H4Y5 243 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 ZNF71Q9NQZ8 489 aaPredicted RBP11.65□□□□□ -0.54
LINC00888-202ENST00000471496 KCMF1Q9P0J7 381 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 GRID1Q9ULK0 1009 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 CLDN16Q9Y5I7 305 aa11.65□□□□□ -0.54
LINC00888-202ENST00000471496 SPENQ96T58 3664 aaKnown RBP11.65□□□□□ -0.55
LINC00888-202ENST00000471496 A6NL46 340 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 FOXE1O00358 373 aaPredicted RBP11.64□□□□□ -0.55
LINC00888-202ENST00000471496 SAP18O00422 153 aaKnown RBP11.64□□□□□ -0.55
LINC00888-202ENST00000471496 PLPP1O14494 284 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 COPEO14579 308 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 PCDH17O14917 1159 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 SUPT7LO94864 414 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 SCELO95171 688 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 HPP00738 406 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 FHP07954 510 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 C8orf89P0DMQ9 161 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 RNH1P13489 461 aaKnown RBP11.64□□□□□ -0.55
LINC00888-202ENST00000471496 CERS1P27544 350 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 CCT5P48643 541 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 HNRNPFP52597 415 aaKnown RBP11.64□□□□□ -0.55
LINC00888-202ENST00000471496 RPS13P62277 151 aaKnown RBP11.64□□□□□ -0.55
LINC00888-202ENST00000471496 BTG2P78543 158 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 EEF1A2Q05639 463 aaKnown RBP11.64□□□□□ -0.55
LINC00888-202ENST00000471496 AIMP2Q13155 320 aaKnown RBP11.64□□□□□ -0.55
LINC00888-202ENST00000471496 DDX39BQ13838 428 aaKnown RBP11.64□□□□□ -0.55
LINC00888-202ENST00000471496 CCDC153Q494R4 210 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 MINDY4Q4G0A6 757 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 TMEM35AQ53FP2 167 aa11.64□□□□□ -0.55
LINC00888-202ENST00000471496 ANKRD37Q7Z713 158 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms