RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 DENND6AQ8IWF6 608 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 SULF2Q8IWU5 870 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 CHERPQ8IWX8 916 aaKnown RBP8.52□□□□□ -1.05
CPSF4-211ENST00000471455 DMRTC2Q8IXT2 367 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-211ENST00000471455 ARMC10Q8N2F6 343 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 KIF2BQ8N4N8 673 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 ZFP62Q8NB50 900 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-211ENST00000471455 ZNF740Q8NDX6 193 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 TRPV3Q8NET8 790 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 OR5T3Q8NGG3 340 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 NT5CQ8TCD5 201 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 CREB3L4Q8TEY5 395 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 NINJ1Q92982 152 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 AARSD1Q9BTE6 412 aaKnown RBP8.52□□□□□ -1.05
CPSF4-211ENST00000471455 ATG10Q9H0Y0 220 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 C20orf96Q9NUD7 363 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-211ENST00000471455 ARL15Q9NXU5 204 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 TNFRSF10DQ9UBN6 386 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 ZFP69BQ9UJL9 534 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 FBXO5Q9UKT4 447 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 GUCA1BQ9UMX6 200 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 ERVK-11Q9UQG0 969 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 PDE10AQ9Y233 779 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 MMACHCQ9Y4U1 282 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 DCHS2Q6V1P9 2916 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 AKAP9Q99996 3911 aa8.52□□□□□ -1.05
CPSF4-211ENST00000471455 ABCA4P78363 2273 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 SCN3AQ9NY46 2000 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 A0A088AWK7 358 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 TRBV11-1A0A0K0K1C0 115 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 TCRBV16S1A1N1A0A5B0 115 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 FAM221AA4D161 298 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 BCKDKO14874 412 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 HS6ST1O60243 411 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 SASH3O75995 380 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 NADKO95544 446 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-211ENST00000471455 ZNF888P0CJ79 500 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-211ENST00000471455 CD99P14209 185 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 ZNF10P21506 573 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-211ENST00000471455 HPDP32754 393 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-211ENST00000471455 VPS41P49754 854 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 SSR4P51571 173 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 PLGLB1Q02325 96 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 PLAURQ03405 335 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 CSHL1Q14406 222 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 SIX1Q15475 284 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-211ENST00000471455 PHKG1Q16816 387 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 DUPD1Q68J44 220 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 ZNF549Q6P9A3 640 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 GK5Q6ZS86 529 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 FGD2Q7Z6J4 655 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 AMER2Q8N7J2 671 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 MCUQ8NE86 351 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 B3GNT7Q8NFL0 401 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 OR5M3Q8NGP4 307 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 C16orf52Q8NHV5 167 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 SLC5A11Q8WWX8 675 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 VMP1Q96GC9 406 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 FBXW2Q9UKT8 454 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 RNF6Q9Y252 685 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 MRPS33Q9Y291 106 aaKnown RBP8.51□□□□□ -1.05
CPSF4-211ENST00000471455 MED16Q9Y2X0 877 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 ANKHD1Q8IWZ3 2542 aaKnown RBP8.51□□□□□ -1.05
CPSF4-211ENST00000471455 NF1P21359 2839 aa8.51□□□□□ -1.05
CPSF4-211ENST00000471455 IGKV3D-11A0A0A0MRZ8 115 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 ZCWPW2A0A1B0GU75 182 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 TCRBV7S3A2A0A539 114 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 NKX2-6A6NCS4 301 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 OR14I1A6ND48 311 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 A8MVJ9 347 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 CLDN4O14493 209 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 LCMT2O60294 686 aaKnown RBP8.5□□□□□ -1.05
CPSF4-211ENST00000471455 ITGA10O75578 1167 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 MYO1DO94832 1006 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 TOXO94900 526 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 HOXD4P09016 255 aaPredicted RBP8.5□□□□□ -1.05
CPSF4-211ENST00000471455 ENO2P09104 434 aaPredicted RBP8.5□□□□□ -1.05
CPSF4-211ENST00000471455 NPPBP16860 134 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 MAOAP21397 527 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 KCNJ1P48048 391 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 ST13P50502 369 aaKnown RBP8.5□□□□□ -1.05
CPSF4-211ENST00000471455 TERF1P54274 439 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 IL2P60568 153 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 STXBP1P61764 594 aaKnown RBP8.5□□□□□ -1.05
CPSF4-211ENST00000471455 OLR1P78380 273 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 RCN2Q14257 317 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 TRIP13Q15645 432 aaPredicted RBP8.5□□□□□ -1.05
CPSF4-211ENST00000471455 CMPK2Q5EBM0 449 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 NDUFAF5Q5TEU4 345 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 HECTD2Q5U5R9 776 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 MBOAT1Q6ZNC8 495 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 KIAA0408Q6ZU52 694 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 CAND1Q86VP6 1230 aaKnown RBP8.5□□□□□ -1.05
CPSF4-211ENST00000471455 SLC22A16Q86VW1 577 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 TMEM139Q8IV31 216 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 TTLQ8NG68 377 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 OR4K1Q8NGD4 311 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 OR56A3Q8NH54 315 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 ASB15Q8WXK1 588 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 LINGO1Q96FE5 620 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms