RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DNAJC9Q8WXX5 260 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 DUSP26Q9BV47 211 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 SARGQ9BW04 601 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 BTNL2Q9UIR0 455 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 PCDHB14Q9Y5E9 798 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 FAM149AA5PLN7 773 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 GABRR3A8MPY1 467 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 ARPC2O15144 300 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 KLK1P06870 262 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 ADRB1P08588 477 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 UMPSP11172 480 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 AHRP35869 848 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 GRIA3P42263 894 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 MTPNP58546 118 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 YBX1P67809 324 aaKnown RBP16.66■□□□□ 0.26
HSPG2-208ENST00000471322 TMEM35AQ53FP2 167 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 NAGSQ8N159 534 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 C16orf78Q8WTQ4 265 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 POP5Q969H6 163 aaKnown RBP16.66■□□□□ 0.26
HSPG2-208ENST00000471322 RGMAQ96B86 450 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 CCDC115Q96NT0 180 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 PANX1Q96RD7 426 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 BHLHE41Q9C0J9 482 aaPredicted RBP16.66■□□□□ 0.26
HSPG2-208ENST00000471322 POT1Q9NUX5 634 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 SLC25A37Q9NYZ2 338 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 EGFL7Q9UHF1 273 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 ADAM29Q9UKF5 820 aa16.66■□□□□ 0.26
HSPG2-208ENST00000471322 IGKV1-8A0A0C4DH67 115 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 PRAMEF33A0A0G2JMD5 474 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 ARHGAP10A1A4S6 786 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 EVPLLA8MZ36 301 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 ISM1B1AKI9 464 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 SAP18O00422 153 aaKnown RBP16.65■□□□□ 0.26
HSPG2-208ENST00000471322 PEX1O43933 1283 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 VIPP01282 170 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 GPIP06744 558 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 LAMP1P11279 417 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 IL10P22301 178 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 ARFIP1P53367 373 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 WNT3P56703 355 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 CMPK2Q5EBM0 449 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 MTX3Q5HYI7 312 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 RNF111Q6ZNA4 994 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 SPPL2CQ8IUH8 684 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 MSRB3Q8IXL7 192 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 NATD1Q8N6N6 113 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 Q8N9G6 341 aaPredicted RBP16.65■□□□□ 0.26
HSPG2-208ENST00000471322 CATSPER1Q8NEC5 780 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 WDR48Q8TAF3 677 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 CCDC74AQ96AQ1 378 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 ZNF583Q96ND8 569 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 TRIM8Q9BZR9 551 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 SYNDIG1Q9H7V2 258 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 CCM2LQ9NUG4 571 aaPredicted RBP16.65■□□□□ 0.26
HSPG2-208ENST00000471322 ARMC1Q9NVT9 282 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 NEUROG3Q9Y4Z2 214 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 LAMA5O15230 3695 aa16.65■□□□□ 0.26
HSPG2-208ENST00000471322 FEZF1A0PJY2 475 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 EME2A4GXA9 379 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 FAM221BA6H8Z2 402 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 RNASET2O00584 256 aaKnown RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 CAPN5O15484 640 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 SCN2BO60939 215 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 FKBP9O95302 570 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 ATP6V1B2P21281 511 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 PSMA4P25789 261 aaKnown RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 DUSP3P51452 185 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 C2orf80Q0P641 193 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 PDE7AQ13946 482 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 TRIP10Q15642 601 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 C14orf28Q4W4Y0 310 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 CCNYL2Q5T2Q4 361 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 FAM71E1Q6IPT2 247 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 OGFOD3Q6PK18 319 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 ANKRD46Q86W74 232 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 ZNF761Q86XN6 746 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 RBM12BQ8IXT5 1001 aaKnown RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 TRPV3Q8NET8 790 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 OR2T12Q8NG77 320 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 CPPED1Q9BRF8 314 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 INPP5KQ9BT40 448 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 DPH7Q9BTV6 452 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 KLHL4Q9C0H6 718 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 ABCG4Q9H172 646 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 KAT8Q9H7Z6 458 aaKnown RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 SPHK1Q9NYA1 384 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 SH3BP4Q9P0V3 963 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 GMPR2Q9P2T1 348 aaKnown RBP16.64■□□□□ 0.25
HSPG2-208ENST00000471322 RNF215Q9Y6U7 377 aa16.64■□□□□ 0.25
HSPG2-208ENST00000471322 DHRS12A0PJE2 317 aa16.63■□□□□ 0.25
HSPG2-208ENST00000471322 PLPP1O14494 284 aa16.63■□□□□ 0.25
HSPG2-208ENST00000471322 DKK1O94907 266 aa16.63■□□□□ 0.25
HSPG2-208ENST00000471322 ZCCHC18P0CG32 403 aa16.63■□□□□ 0.25
HSPG2-208ENST00000471322 PIM1P11309 404 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-208ENST00000471322 HOXB9P17482 250 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-208ENST00000471322 PPIBP23284 216 aaKnown RBP16.63■□□□□ 0.25
HSPG2-208ENST00000471322 PTPN6P29350 595 aa16.63■□□□□ 0.25
HSPG2-208ENST00000471322 PEBP1P30086 187 aaKnown RBP16.63■□□□□ 0.25
HSPG2-208ENST00000471322 TAS2R50P59544 299 aa16.63■□□□□ 0.25
HSPG2-208ENST00000471322 CYP4F2P78329 520 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms