RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CYBAP13498 195 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 GAP43P17677 238 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 CYP11B2P19099 503 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 PPP1R2P41236 205 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 SP4Q02446 784 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 PNOCQ13519 176 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 GIT2Q14161 759 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 SNAI3Q3KNW1 292 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 ITPRIPL2Q3MIP1 535 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 C1QTNF12Q5T7M4 302 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 IL27RAQ6UWB1 636 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 C1orf186Q6ZWK4 172 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 GPBP1Q86WP2 473 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 TMEM139Q8IV31 216 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 CCDC60Q8IWA6 550 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-202ENST00000471307 CCDC65Q8IXS2 484 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 CFAP206Q8IYR0 622 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 TAGAPQ8N103 731 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 NKAIN3Q8N8D7 197 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 AMER3Q8N944 861 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 MLKLQ8NB16 471 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 NPEPL1Q8NDH3 523 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 OR6J1Q8NGC5 347 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 OR52N5Q8NH56 324 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 LRRC15Q8TF66 581 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 DNAJC19Q96DA6 116 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 CCDC43Q96MW1 224 aaKnown RBP4.69□□□□□ -1.66
CCDC39-202ENST00000471307 NAT10Q9H0A0 1025 aaKnown RBP4.69□□□□□ -1.66
CCDC39-202ENST00000471307 S1PR5Q9H228 398 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 ZWILCHQ9H900 591 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 ARGLU1Q9NWB6 273 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-202ENST00000471307 WRAP73Q9P2S5 460 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-202ENST00000471307 B3GAT1Q9P2W7 334 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 EPHA6Q9UF33 1036 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 TBC1D29Q9UFV1 150 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 ZNF215Q9UL58 517 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-202ENST00000471307 ODF2LQ9ULJ1 636 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 TRIM17Q9Y577 477 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 TDRD15B5MCY1 1934 aaKnown RBP4.69□□□□□ -1.66
CCDC39-202ENST00000471307 IGSF9BQ9UPX0 1349 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 A0A087WWV3 80 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 MAGEB2O15479 319 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 KLRC4O43908 158 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 TBCAO75347 108 aaKnown RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 ZWINTO95229 277 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 DNTTP04053 509 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 LGALS2P05162 132 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 GABRA5P31644 462 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 GSCP56915 257 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 ASIC1P78348 528 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 MC1RQ01726 317 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 ROR1Q01973 937 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 PRKCEQ02156 737 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 PRPF4BQ13523 1007 aaKnown RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 PKN2Q16513 984 aaKnown RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 STX1AQ16623 288 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 UGCGQ16739 394 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 KLHL26Q53HC5 615 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 C2CD6Q53TS8 623 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 HERC4Q5GLZ8 1057 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 ELFN2Q5R3F8 820 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 ZNF658Q5TYW1 1059 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 TLK2Q86UE8 772 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 HOGA1Q86XE5 327 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 SPAG16Q8N0X2 631 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 TTC30BQ8N4P2 665 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 POC5Q8NA72 575 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 TRPV1Q8NER1 839 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 ATP8B4Q8TF62 1192 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 PTPMT1Q8WUK0 201 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 KIFAP3Q92845 792 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 JAKMIP2Q96AA8 810 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 VMP1Q96GC9 406 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 CNDP2Q96KP4 475 aaKnown RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 CEP170P1Q96L14 293 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 JPH2Q9BR39 696 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 MIS12Q9H081 205 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 UPF3AQ9H1J1 476 aaKnown RBP4.68□□□□□ -1.66
CCDC39-202ENST00000471307 BLZF1Q9H2G9 400 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 TSPY26PQ9H489 355 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 EXOC1Q9NV70 894 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 PANK4Q9NVE7 773 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 MAN1B1Q9UKM7 699 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 SNX8Q9Y5X2 465 aa4.68□□□□□ -1.66
CCDC39-202ENST00000471307 MYH11P35749 1972 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 ZSWIM8A7E2V4 1837 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 COL1A2P08123 1366 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 IGKV6-21A0A0C4DH24 114 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 H0YCG3 227 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 HAS3O00219 553 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 CAPN2P17655 700 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 TRIM21P19474 475 aaKnown RBP4.67□□□□□ -1.66
CCDC39-202ENST00000471307 CASP1P29466 404 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 CCND3P30281 292 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-202ENST00000471307 TLX1P31314 330 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-202ENST00000471307 ACTN2P35609 894 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 HNF4AP41235 474 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 ZNF131P52739 623 aa4.67□□□□□ -1.66
CCDC39-202ENST00000471307 TPD52P55327 224 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms