RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 IQCCQ4KMZ1 466 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 PARP10Q53GL7 1025 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 RAB12Q6IQ22 244 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 ZNF774Q6NX45 483 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 PHLDB2Q86SQ0 1253 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 CROCCP3Q8IVE0 287 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 SLC22A15Q8IZD6 547 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 ABHD12Q8N2K0 398 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 SFRP1Q8N474 314 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 POM121L12Q8N7R1 296 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 CASP10Q92851 521 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 CHCHD5Q9BSY4 110 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 TUBB1Q9H4B7 451 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 THAP9Q9H5L6 903 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 RPF1Q9H9Y2 349 aaKnown RBP3.2□□□□□ -1.9
BRCA2-202ENST00000470094 TRPC4Q9UBN4 977 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 MOSPD1Q9UJG1 213 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 APPL1Q9UKG1 709 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 POMT2Q9UKY4 750 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 ODF2LQ9ULJ1 636 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 GPR132Q9UNW8 380 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 PLCL2Q9UPR0 1127 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 HEG1Q9ULI3 1381 aa3.2□□□□□ -1.9
BRCA2-202ENST00000470094 TRAV18A0A075B6X5 111 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 ACOD1A6NK06 481 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 C19orf81C9J6K1 198 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 KBTBD13C9JR72 458 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 E5RGE8 158 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 H3BMM5 538 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 CTDSPLO15194 276 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 MAGEB2O15479 319 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 ECE2O60344 883 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 SNAP91O60641 907 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 MTRF1O75570 445 aaKnown RBP3.19□□□□□ -1.9
BRCA2-202ENST00000470094 HMOX1P09601 288 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 P4HA1P13674 534 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 C4BPBP20851 252 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 SSTR1P30872 391 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 NME5P56597 212 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 KIAA1024LP59773 190 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 CD300CQ08708 224 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 KIAA0141Q14154 515 aaPredicted RBP3.19□□□□□ -1.9
BRCA2-202ENST00000470094 PODNL1Q6PEZ8 512 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 DHRS11Q6UWP2 260 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 BTNL8Q6UX41 500 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 GPR141Q7Z602 305 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 SLC47A2Q86VL8 602 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 CNTN4Q8IWV2 1026 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 APCDD1Q8J025 514 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 CCDC185Q8N715 623 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 LPCAT1Q8NF37 534 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 PSMA8Q8TAA3 256 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 ATG101Q9BSB4 218 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 NACAP1Q9BZK3 213 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 TRIM7Q9C029 511 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 LSG1Q9H089 658 aaKnown RBP3.19□□□□□ -1.9
BRCA2-202ENST00000470094 HEXA-AS1Q9H8Q6 139 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 RNPEPL1Q9HAU8 725 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 PNPLA3Q9NST1 481 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 TMEM161AQ9NX61 479 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 GTSE1Q9NYZ3 720 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 THAP10Q9P2Z0 257 aaPredicted RBP3.19□□□□□ -1.9
BRCA2-202ENST00000470094 NSG2Q9Y328 171 aa3.19□□□□□ -1.9
BRCA2-202ENST00000470094 IGLV4-3A0A075B6K6 122 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 A0A0A6YYC8 382 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 GLTPD2A6NH11 291 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 PRSS46E5RG02 174 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 NPIPA3F8WFD2 350 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 I3L1I5 382 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 VEGFDO43915 354 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 KIF5CO60282 957 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 NME6O75414 186 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 AKAP3O75969 853 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 C8orf89P0DMQ9 161 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 EDNRAP25101 427 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 GIFP27352 417 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 PIK3R1P27986 724 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 PKLRP30613 574 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 IER3P46695 156 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 OR3A3P47888 321 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 CSRP3P50461 194 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 CLCN4P51793 760 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 FKBP3Q00688 224 aaKnown RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 CBX3Q13185 183 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 SMC1AQ14683 1233 aaKnown RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 HFEQ30201 348 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 AARDQ4LEZ3 155 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 HIGD2BQ4VC39 106 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 ZNF542PQ5EBM4 170 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 ZNF841Q6ZN19 808 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 RNF130Q86XS8 419 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 CCDC83Q8IWF9 413 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 PEX5LQ8IYB4 626 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 RTL3Q8N8U3 475 aaKnown RBP3.18□□□□□ -1.9
BRCA2-202ENST00000470094 OR9Q2Q8NGE9 314 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 NCOA7Q8NI08 942 aa3.18□□□□□ -1.9
BRCA2-202ENST00000470094 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms