RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 MS4A8Q9BY19 250 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 NECTIN3Q9NQS3 549 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 ZNF180Q9UJW8 692 aa13.19□□□□□ -0.3
COMMD3-208ENST00000470045 SAGE2PA6NJ88 616 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 B3GALT2O43825 422 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 SEMA7AO75326 666 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 SCELO95171 688 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 UQCRHP07919 91 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 INHBAP08476 426 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 EPB42P16452 691 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 CERS1P27544 350 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 SERPINB1P30740 379 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 MSH2P43246 934 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 PLA2G16P53816 162 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 ALDH18A1P54886 795 aaKnown RBP13.18□□□□□ -0.3
COMMD3-208ENST00000470045 MTTPP55157 894 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 ACTN3Q08043 901 aaPredicted RBP13.18□□□□□ -0.3
COMMD3-208ENST00000470045 PCBP2Q15366 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
COMMD3-208ENST00000470045 HIST2H2ACQ16777 129 aaPredicted RBP13.18□□□□□ -0.3
COMMD3-208ENST00000470045 EIF2S3LQ2VIR3 472 aaKnown RBP13.18□□□□□ -0.3
COMMD3-208ENST00000470045 HIST2H2AA3Q6FI13 130 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 GRHL2Q6ISB3 625 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 METTL2BQ6P1Q9 378 aaKnown RBP13.18□□□□□ -0.3
COMMD3-208ENST00000470045 MED27Q6P2C8 311 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 KLC3Q6P597 504 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 UBE3DQ7Z6J8 389 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 CRLF3Q8IUI8 442 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 PLD6Q8N2A8 252 aaKnown RBP13.18□□□□□ -0.3
COMMD3-208ENST00000470045 ARMC10Q8N2F6 343 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 CEP112Q8N8E3 955 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 NFAM1Q8NET5 270 aaPredicted RBP13.18□□□□□ -0.3
COMMD3-208ENST00000470045 DCAKDQ8WVC6 231 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 UBE2E3Q969T4 207 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 PSMG3-AS1Q96PY0 264 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 TAAR6Q96RI8 345 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 KCNK13Q9HB14 408 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 PRDM7Q9NQW5 492 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 STMN3Q9NZ72 180 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 DAPP1Q9UN19 280 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 TSC22D4Q9Y3Q8 395 aa13.18□□□□□ -0.3
COMMD3-208ENST00000470045 ANKUB1A6NFN9 424 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 TGFBR3LH3BV60 316 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 CYR61O00622 381 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 CDK2AP1O14519 115 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 PRAMEF2O60811 474 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 AGFG2O95081 481 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 F10P00742 488 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 ABHD2P08910 425 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 GFAPP14136 432 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 CNTFP26441 200 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 HNRNPFP52597 415 aaKnown RBP13.17□□□□□ -0.3
COMMD3-208ENST00000470045 LIM2P55344 173 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 HSD17B7P56937 341 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 TERF2Q15554 542 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 MEP1AQ16819 746 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 PFKFB4Q16877 469 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 FCRLBQ6BAA4 426 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 FAM180AQ6UWF9 173 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 ZNF793Q6ZN11 406 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 TAOK1Q7L7X3 1001 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 BEST3Q8N1M1 668 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 SLC5A8Q8N695 610 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 TEX9Q8N6V9 391 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 BCORP1Q8N888 145 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 MDS2Q8NDY4 140 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 TMEM52Q8NDY8 209 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 SRFBP1Q8NEF9 429 aaKnown RBP13.17□□□□□ -0.3
COMMD3-208ENST00000470045 ARMC2Q8NEN0 867 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 OR7G3Q8NG95 312 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 KCNC2Q96PR1 638 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 F2RL3Q96RI0 385 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 ROGDIQ9GZN7 287 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 VPS11Q9H270 941 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 KCMF1Q9P0J7 381 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 PPIEQ9UNP9 301 aaKnown RBP13.17□□□□□ -0.3
COMMD3-208ENST00000470045 PCDHGB6Q9Y5F9 930 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 DOPEY1Q5JWR5 2465 aa13.17□□□□□ -0.3
COMMD3-208ENST00000470045 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 UTP20O75691 2785 aaKnown RBP13.16□□□□□ -0.3
COMMD3-208ENST00000470045 SPTBN1Q01082 2364 aaKnown RBP13.16□□□□□ -0.3
COMMD3-208ENST00000470045 A0A087WUV0 522 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-208ENST00000470045 SYNDIG1LA6NDD5 238 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 LRRC14BA6NHZ5 514 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 A8MUI8 341 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 MAN1A2O60476 641 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 UGDHO60701 494 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 KRT38O76015 456 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 RNF224P0DH78 156 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 COL6A2P12110 1019 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 EDN3P14138 238 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 TDGF1P3P51864 188 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 TAS2R50P59544 299 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 TGM3Q08188 693 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 TUBA3CQ13748 450 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 TMEM35AQ53FP2 167 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 LIPJQ5W064 366 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 TUBA3EQ6PEY2 450 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 KIF2BQ8N4N8 673 aa13.16□□□□□ -0.3
COMMD3-208ENST00000470045 FAM47BQ8NA70 645 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms