RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ASCL1P50553 236 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 TBX2Q13207 712 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 XKR6Q5GH73 641 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 CASC4Q6P4E1 433 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 LCTLQ6UWM7 567 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 TC2NQ8N9U0 490 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 SPATA3Q8NHX4 192 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 RNASE6Q93091 150 aaKnown RBP17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 GPR21Q99679 349 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 HAUS8Q9BT25 410 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 FBXO6Q9NRD1 293 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 KLHL42Q9P2K6 505 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 ZNF223Q9UK11 482 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 DHRS7Q9Y394 339 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 EPN1Q9Y6I3 576 aaPredicted RBP17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 COL6A5A8TX70 2615 aa17.59■□□□□ 0.41
NCKIPSD-209ENST00000470006 URADA6NGE7 173 aa17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 PRKNO60260 465 aaPredicted RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 SUSD5O60279 629 aa17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 RPL22P35268 128 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 DCAF7P61962 342 aa17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 THOC5Q13769 683 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 BMPR2Q13873 1038 aa17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 DAZAP2Q15038 168 aaPredicted RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 PHKG1Q16816 387 aa17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 ZNF470Q6ECI4 717 aa17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 CXXC5Q7LFL8 322 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 SYCE1Q8N0S2 351 aa17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 UTP15Q8TED0 518 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 FRMD8P1Q9BZ68 369 aaPredicted RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 EIF2B3Q9NR50 452 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 MTRF1LQ9UGC7 380 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 SOX13Q9UN79 622 aa17.58■□□□□ 0.4
NCKIPSD-209ENST00000470006 TRGV5A0A0B4J1U4 118 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 TRBC2A0A5B9 178 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 PABPN1LA6NDY0 278 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 ARHGEF9O43307 516 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 P04436 131 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 EPXP11678 715 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 NPPBP16860 134 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 DNASE1L1P49184 302 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 TERF1P54274 439 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 TERF2Q15554 542 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 SEL1L2Q5TEA6 688 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 SHEQ5VZ18 495 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 KIAA0930Q6ICG6 404 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 RTL4Q6ZR62 310 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 VWA5B2Q8N398 1253 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 RELL2Q8NC24 303 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 KCNJ9Q92806 393 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 RASL10BQ96S79 203 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 YIPF4Q9BSR8 244 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 TSGA10Q9BZW7 698 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 LACRTQ9GZZ8 138 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 CLK4Q9HAZ1 481 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 SACM1LQ9NTJ5 587 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 MYOTQ9UBF9 498 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 ADAMTS6Q9UKP5 1117 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 PDE10AQ9Y233 779 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 MMACHCQ9Y4U1 282 aa17.57■□□□□ 0.4
NCKIPSD-209ENST00000470006 BTNL10A8MVZ5 291 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 HIST1H2AGP0C0S8 130 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 HIST1H2ADP20671 130 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 PPP2R1BP30154 601 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 PPP2R2BQ00005 443 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 SLC13A2Q13183 592 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 CTBP1Q13363 440 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 HSDL2Q6YN16 418 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 KIAA1328Q86T90 577 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 SLC13A5Q86YT5 568 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 P3H2Q8IVL5 708 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 CA13Q8N1Q1 262 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 LINC01560Q8TB33 94 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 NT5CQ8TCD5 201 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 CD200R1Q8TD46 325 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 PYCR2Q96C36 320 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 HIST1H2AHQ96KK5 128 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 CAPZA3Q96KX2 299 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 HIST1H2AJQ99878 128 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 SH3GL2Q99962 352 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 H2AFJQ9BTM1 129 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 SGPP1Q9BX95 441 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 PARVBQ9HBI1 364 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 PRTFDC1Q9NRG1 225 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 BEX4Q9NWD9 120 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 TUBA8Q9NY65 449 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 ZFP69BQ9UJL9 534 aa17.56■□□□□ 0.4
NCKIPSD-209ENST00000470006 SMAD7O15105 426 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 HCN1O60741 890 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 IFNA16P05015 189 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 C8GP07360 202 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 CSHL1Q14406 222 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 POU4F3Q15319 338 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 ZNF549Q6P9A3 640 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 GSTA5Q7RTV2 222 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 KIF18BQ86Y91 864 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 DENND6AQ8IWF6 608 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 ABHD11Q8NFV4 315 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 SNF8Q96H20 258 aa17.55■□□□□ 0.4
NCKIPSD-209ENST00000470006 FAR2Q96K12 515 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms