RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 SCELO95171 688 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 CHEK2O96017 543 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 CCNYL3P0C7X3 344 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 TCN2P20062 427 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 HIST1H1TP22492 207 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 TPP2P29144 1249 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 MDH1P40925 334 aaKnown RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 MTTPP55157 894 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 RPS18P62269 152 aaKnown RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 ERV3-1Q14264 604 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 IMPG1Q17R60 797 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 AP5B1Q2VPB7 878 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 VWA2Q5GFL6 755 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 MLIPQ5VWP3 458 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 MRPL14Q6P1L8 145 aaKnown RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 SHISA6Q6ZSJ9 500 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 SNIP1Q8TAD8 396 aaKnown RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 C11orf24Q96F05 449 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 MAPKAP1Q9BPZ7 522 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 DPH2Q9BQC3 489 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 NUF2Q9BZD4 464 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 IFT80Q9P2H3 777 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 TRPC4Q9UBN4 977 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 CDC14AQ9UNH5 594 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 MRPS18BQ9Y676 258 aaKnown RBP13.98□□□□□ -0.17
COL9A3-209ENST00000469852 LAMA5O15230 3695 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 DSPP15924 2871 aaKnown RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 A0A0A6YYD5 115 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 OR2W5A6NFC9 320 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 FAM227AF5H4B4 570 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 ZNF195O14628 629 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 LSM1O15116 133 aaKnown RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 RSL1D1O76021 490 aaKnown RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 KLK1P06870 262 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 WT1P19544 449 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 AGXTP21549 392 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 DLSTP36957 453 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 LIM2P55344 173 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 TGM3Q08188 693 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 NCF4Q15080 339 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 NR6A1Q15406 480 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 SPDYAQ5MJ70 313 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 VWA5B1Q5TIE3 1220 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 OVCH1Q7RTY7 1134 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 NUDT13Q86X67 352 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 CRLF3Q8IUI8 442 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 WDR75Q8IWA0 830 aaKnown RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 ZC3H7AQ8IWR0 971 aaKnown RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 PRSS58Q8IYP2 241 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 IL22RA1Q8N6P7 574 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 ENDOVQ8N8Q3 282 aaKnown RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 TMEM52Q8NDY8 209 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 SRFBP1Q8NEF9 429 aaKnown RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 OR51Q1Q8NH59 317 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 C19orf60Q96EN9 201 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 PEX11GQ96HA9 241 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 SERINC2Q96SA4 455 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 CSF3RQ99062 836 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 SPSB2Q99619 263 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 YIPF2Q9BWQ6 316 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 DDX31Q9H8H2 851 aaKnown RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 COPS7BQ9H9Q2 264 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-209ENST00000469852 WDR70Q9NW82 654 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 KCMF1Q9P0J7 381 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 IL17BQ9UHF5 180 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 MAP4K5Q9Y4K4 846 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 ATRXP46100 2492 aa13.97□□□□□ -0.17
COL9A3-209ENST00000469852 BAHCC1Q9P281 2608 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 PCSK5Q92824 1860 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 IGLV3-12A0A075B6K2 115 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 NPIPB8E9PQR5 432 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 SLC28A1O00337 649 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 RGS14O43566 566 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 B3GALT2O43825 422 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 EDF1O60869 148 aaKnown RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 PRKRAO75569 313 aaKnown RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 KLF7O75840 302 aaPredicted RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 LIFP15018 202 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 PRPH2P23942 346 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 XCR1P46094 333 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 HNRNPFP52597 415 aaKnown RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 HK2P52789 917 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 ARFIP1P53367 373 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 HNRNPH2P55795 449 aaKnown RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 SLAMF1Q13291 335 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 DNASE1L3Q13609 305 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 KIAA0040Q15053 153 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 NKG7Q16617 165 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 GALNTL6Q49A17 601 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 MRM1Q6IN84 353 aaKnown RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 LAPTM4BQ86VI4 370 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 ZCCHC7Q8N3Z6 543 aaKnown RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 ZNF248Q8NDW4 579 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 PIWIL2Q8TC59 973 aaKnown RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 STT3BQ8TCJ2 826 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 KCNE4Q8WWG9 221 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 UCN3Q969E3 161 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 FKBP10Q96AY3 582 aa13.96□□□□□ -0.17
COL9A3-209ENST00000469852 THOC1Q96FV9 657 aaKnown RBP13.96□□□□□ -0.17
COL9A3-209ENST00000469852 MESP1Q9BRJ9 268 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms