RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SRFBP1Q8NEF9 429 aaKnown RBP10.42□□□□□ -0.74
MSH5-212ENST00000467319 OR11G2Q8NGC1 345 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 ADAMTS18Q8TE60 1221 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 PPP4R1Q8TF05 950 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 APOBEC4Q8WW27 367 aaKnown RBP10.42□□□□□ -0.74
MSH5-212ENST00000467319 PEX11GQ96HA9 241 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 KCNA7Q96RP8 456 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 UBL7Q96S82 380 aaPredicted RBP10.42□□□□□ -0.74
MSH5-212ENST00000467319 RBCK1Q9BYM8 510 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 ROGDIQ9GZN7 287 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 STMN4Q9H169 189 aaPredicted RBP10.42□□□□□ -0.74
MSH5-212ENST00000467319 OR51B5Q9H339 312 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 BRF2Q9HAW0 419 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 TMBIM4Q9HC24 238 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 LYRM4Q9HD34 91 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 FARSBQ9NSD9 589 aaKnown RBP10.42□□□□□ -0.74
MSH5-212ENST00000467319 ARGLU1Q9NWB6 273 aaPredicted RBP10.42□□□□□ -0.74
MSH5-212ENST00000467319 P4HTMQ9NXG6 502 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 SNX6Q9UNH7 406 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 CLDN16Q9Y5I7 305 aa10.42□□□□□ -0.74
MSH5-212ENST00000467319 A0A0A6YYD5 115 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 RTCAO00442 366 aaKnown RBP10.41□□□□□ -0.74
MSH5-212ENST00000467319 CYR61O00622 381 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ATXN7O15265 892 aaPredicted RBP10.41□□□□□ -0.74
MSH5-212ENST00000467319 B3GALT2O43825 422 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 NPHS1O60500 1241 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 CEACAM4O75871 244 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ZWINTO95229 277 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 PDYNP01213 254 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 COX6A1P12074 109 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 HSD3B1P14060 373 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ACPPP15309 386 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 JAK1P23458 1154 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 PTX3P26022 381 aaPredicted RBP10.41□□□□□ -0.74
MSH5-212ENST00000467319 HSD3B2P26439 372 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ARRB2P32121 409 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 BSGP35613 385 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 SSR2P43308 183 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 SERPINB4P48594 390 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 EMP2P54851 167 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 FOXA1P55317 472 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 POLE2P56282 527 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 RAB38P57729 211 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ZNF33BQ06732 778 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ASPHQ12797 758 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 CSTF3Q12996 717 aaKnown RBP10.41□□□□□ -0.74
MSH5-212ENST00000467319 RUNX2Q13950 521 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 DCAF10Q5QP82 559 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 CES4AQ5XG92 561 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 QSOX2Q6ZRP7 698 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 SCUBE1Q8IWY4 988 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ACOT4Q8N9L9 421 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 RGMAQ96B86 450 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ZBTB9Q96C00 473 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 FAR2Q96K12 515 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 CSF3RQ99062 836 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 SERPINI1Q99574 410 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 SH3GL2Q99962 352 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 CENPKQ9BS16 269 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 SORBS1Q9BX66 1292 aaKnown RBP10.41□□□□□ -0.74
MSH5-212ENST00000467319 TRIM55Q9BYV6 548 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 CENPHQ9H3R5 247 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 ELOVL6Q9H5J4 265 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 VIPAS39Q9H9C1 493 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 COPS7BQ9H9Q2 264 aaPredicted RBP10.41□□□□□ -0.74
MSH5-212ENST00000467319 KCMF1Q9P0J7 381 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 TUBD1Q9UJT1 453 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 FBXL4Q9UKA2 621 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 MKL2Q9ULH7 1088 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 DAPP1Q9UN19 280 aa10.41□□□□□ -0.74
MSH5-212ENST00000467319 IGHV1-45A0A0A0MS14 117 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 SERTM1A2A2V5 107 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 GOLGA6L10A6NI86 522 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 ARGFXA6NJG6 315 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 SAP18O00422 153 aaKnown RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 BIRC5O15392 142 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 ALOX12BO75342 701 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 SH3BGRLO75368 114 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 EEDO75530 441 aaKnown RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 KRT6AP02538 564 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 KRT6BP04259 564 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 HEXBP07686 556 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 C8orf89P0DMQ9 161 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 SERPINB5P36952 375 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 KRT6CP48668 564 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 RAP1GDS1P52306 607 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 HNRNPFP52597 415 aaKnown RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 SLC18A1P54219 525 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 LIM2P55344 173 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 GALNT1Q10472 559 aaPredicted RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 TBL3Q12788 808 aaKnown RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 CHAF1BQ13112 559 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 RCN2Q14257 317 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 PCOLCEQ15113 449 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 MINDY4Q4G0A6 757 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 CFAP157Q5JU67 520 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 AGBL2Q5U5Z8 902 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 TTC19Q6DKK2 380 aaPredicted RBP10.4□□□□□ -0.74
MSH5-212ENST00000467319 OR4C11Q6IEV9 310 aa10.4□□□□□ -0.74
MSH5-212ENST00000467319 MRM1Q6IN84 353 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms