RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SYNDIG1LA6NDD5 238 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 IPO8O15397 1037 aaKnown RBP2.87□□□□□ -1.95
XRN1-206ENST00000467077 GLRA3O75311 464 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 DDHD2O94830 711 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 PGK1P00558 417 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 TIMP1P01033 207 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 ASNSP08243 561 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 HAPLN1P10915 354 aaPredicted RBP2.87□□□□□ -1.95
XRN1-206ENST00000467077 CYBAP13498 195 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 MYOGP15173 224 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 CYP2A7P20853 494 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 LIG4P49917 911 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 GSCP56915 257 aaPredicted RBP2.87□□□□□ -1.95
XRN1-206ENST00000467077 GCNT1Q02742 428 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 MECOMQ03112 1051 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 NFATC2Q13469 925 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 GRB14Q14449 540 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 FASTKD3Q14CZ7 662 aaKnown RBP2.87□□□□□ -1.95
XRN1-206ENST00000467077 TMEM266Q2M3C6 531 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 CBWD6Q4V339 395 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 CBWD3Q5JTY5 395 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 RPUSD3Q6P087 351 aaKnown RBP2.87□□□□□ -1.95
XRN1-206ENST00000467077 SLC25A47Q6Q0C1 308 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 KRT74Q7RTS7 529 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 POMGNT2Q8NAT1 580 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 KCTD6Q8NC69 237 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 PTERQ96BW5 349 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 SFXN2Q96NB2 322 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 DGAT2Q96PD7 388 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 TXLNGYQ9BZA5 131 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 THAP2Q9H0W7 228 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 MTIF3Q9H2K0 278 aaKnown RBP2.87□□□□□ -1.95
XRN1-206ENST00000467077 MAN2C1Q9NTJ4 1040 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 GDE1Q9NZC3 331 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 NLRC5Q86WI3 1866 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 MROH7-TTC4A0A0A0MT08 1334 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 GAKO14976 1311 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 KIF16BQ96L93 1317 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 MYO9BQ13459 2157 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 DCHS1Q96JQ0 3298 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 KMT2EQ8IZD2 1858 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 TANC1Q9C0D5 1861 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 MYO15AQ9UKN7 3530 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 PI4K2BG5E9Z4 385 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 IDH3BO43837 385 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 MAGEC1O60732 1142 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 CNMDO75829 334 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 CDK2AP2O75956 126 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 SEC24AO95486 1093 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 VTNP04004 478 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 ABCB1P08183 1280 aaPredicted RBP2.86□□□□□ -1.95
XRN1-206ENST00000467077 DARSP14868 501 aaKnown RBP2.86□□□□□ -1.95
XRN1-206ENST00000467077 CSTF2P33240 577 aaKnown RBP eCLIP2.86□□□□□ -1.95
XRN1-206ENST00000467077 ACLYP53396 1101 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 HNRNPKP61978 463 aaKnown RBP eCLIP2.86□□□□□ -1.95
XRN1-206ENST00000467077 GSTO1P78417 241 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 HSPB3Q12988 150 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 PRPF4BQ13523 1007 aaKnown RBP2.86□□□□□ -1.95
XRN1-206ENST00000467077 RASA2Q15283 850 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 SNAPC1Q16533 368 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 SHROOM1Q2M3G4 852 aaPredicted RBP2.86□□□□□ -1.95
XRN1-206ENST00000467077 UGT3A2Q3SY77 523 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 RABL6Q3YEC7 729 aaPredicted RBP2.86□□□□□ -1.95
XRN1-206ENST00000467077 SLC35D3Q5M8T2 416 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 ERMARDQ5T6L9 678 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 C11orf63Q6NUN7 778 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 SLC30A6Q6NXT4 461 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 PLPPR4Q7Z2D5 763 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 ANKRD33Q7Z3H0 272 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 ARHGAP22Q7Z5H3 698 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 PARP8Q8N3A8 854 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 POGLUT1Q8NBL1 392 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 OR1L3Q8NH93 324 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 ZNF519Q8TB69 540 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 SYN2Q92777 582 aaPredicted RBP2.86□□□□□ -1.95
XRN1-206ENST00000467077 CENPTQ96BT3 561 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 FAM20AQ96MK3 541 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 NECTIN4Q96NY8 510 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 ZIM3Q96PE6 472 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 SEPHS2Q99611 448 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 CCDC106Q9BWC9 280 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 PANK4Q9NVE7 773 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 PADI2Q9Y2J8 665 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 ZNF256Q9Y2P7 627 aaPredicted RBP2.86□□□□□ -1.95
XRN1-206ENST00000467077 TRPV2Q9Y5S1 764 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 RPS6KL1Q9Y6S9 549 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 MROH7Q68CQ1 1323 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 FRYLO94915 3013 aa2.86□□□□□ -1.95
XRN1-206ENST00000467077 ATG2AQ2TAZ0 1938 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 MYH4Q9Y623 1939 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 HCFC1P51610 2035 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 NEMP2A6NFY4 417 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 ACOD1A6NK06 481 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 UBE2CO00762 179 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 EPHB6O15197 1021 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 PSMD10O75832 226 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 BAG3O95817 575 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 IGHV2-70P01814 119 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 CA3P07451 260 aa2.85□□□□□ -1.95
XRN1-206ENST00000467077 LINGO3P0C6S8 592 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms