RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 CCT6BQ92526 530 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 APOPT1Q96IL0 206 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 FAR2Q96K12 515 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 IMMP1LQ96LU5 166 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 CDK15Q96Q40 435 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 FRG2BQ96QU4 278 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 WDR77Q9BQA1 342 aaPredicted RBP8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 SLC25A23Q9BV35 468 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 YIPF2Q9BWQ6 316 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 GSTO2Q9H4Y5 243 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 SEMA4BQ9NPR2 832 aaPredicted RBP8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 OXSMQ9NWU1 459 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 KCMF1Q9P0J7 381 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 SENP1Q9P0U3 644 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 C5AR2Q9P296 337 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 DAPP1Q9UN19 280 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 TP53TG5Q9Y2B4 290 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 PLLPQ9Y342 182 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 MMACHCQ9Y4U1 282 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 CLDN16Q9Y5I7 305 aa8.92□□□□□ -0.98
SDCCAG3-208ENST00000466579 SPTA1P02549 2419 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 TCRBV16S1A1N1A0A5B0 115 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SERTM1A2A2V5 107 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SYNDIG1LA6NDD5 238 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 H3BQF6 201 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 K7EM74 188 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 PLPP1O14494 284 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 B3GALT2O43825 422 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 TYROBPO43914 113 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SUPT7LO94864 414 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 ETHE1O95571 254 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 TGFB1P01137 390 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 PRB1P04280 392 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SERPINA7P05543 415 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 MYL2P10916 166 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 CPA3P15088 417 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 BSGP35613 385 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 CCL11P51671 97 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 LIM2P55344 173 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 PKNOX1P55347 436 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 HSD17B7P56937 341 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 RPS13P62277 151 aaKnown RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 PHEXP78562 749 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF33BQ06732 778 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 LCP2Q13094 533 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 MINDY4Q4G0A6 757 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 BEND6Q5SZJ8 279 aaPredicted RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 VWA5B1Q5TIE3 1220 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 OR4C11Q6IEV9 310 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 MRM1Q6IN84 353 aaKnown RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 IGFL2Q6UWQ7 119 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 IGFL3Q6UXB1 125 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 LRIG3Q6UXM1 1119 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 RIPOR1Q6ZS17 1223 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 FRMD7Q6ZUT3 714 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 CPEB2Q7Z5Q1 589 aaKnown RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 MILR1Q7Z6M3 343 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SRRM1Q8IYB3 904 aaKnown RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 RNF175Q8N4F7 328 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 ACOT4Q8N9L9 421 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 TRPC4APQ8TEL6 797 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 METTL21AQ8WXB1 218 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 ATP6V1E2Q96A05 226 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 RGMAQ96B86 450 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 C8orf44Q96CB5 159 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 MTERF1Q99551 399 aaKnown RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SERPINI1Q99574 410 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 TUBB6Q9BUF5 446 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 NUDT9Q9BW91 350 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SLC29A3Q9BZD2 475 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 OR51B5Q9H339 312 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 ZNF552Q9H707 407 aaPredicted RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 DDX31Q9H8H2 851 aaKnown RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 BRF2Q9HAW0 419 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SSU72Q9NP77 194 aaKnown RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 PRDM9Q9NQV7 894 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 RIC8BQ9NVN3 520 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 GPR83Q9NYM4 423 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 C19orf25Q9UFG5 118 aaPredicted RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 MID2Q9UJV3 735 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 CPAMD8Q8IZJ3 1885 aa8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 SPENQ96T58 3664 aaKnown RBP8.91□□□□□ -0.98
SDCCAG3-208ENST00000466579 A0A0A6YYD5 115 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 NSG1A0A0A6YYJ2 146 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 A0A0G2JN53 185 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 BLACEA4D250 179 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 OR2W5A6NFC9 320 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 B8ZZF3 427 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 FAM227AF5H4B4 570 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 MASP2O00187 686 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PSMD12O00232 456 aaPredicted RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 RTCAO00442 366 aaKnown RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 PRMT3O60678 531 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ESRRBO95718 433 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ENO1P06733 434 aaKnown RBP8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 ICAM2P13598 275 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 HSD3B1P14060 373 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 HSD3B2P26439 372 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 CERS1P27544 350 aa8.9□□□□□ -0.98
SDCCAG3-208ENST00000466579 SOX11P35716 441 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms