RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 MAPK15Q8TD08 544 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.32□□□□□ -1.883e-6■■■■■ 40.5
SORT1-202ENST00000466471 DACT3Q96B18 629 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 CCDC127Q96BQ5 260 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TAMM41Q96BW9 452 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 NRBF2Q96F24 287 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 AURKBQ96GD4 344 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 ZNF486Q96H40 463 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 PGAM5Q96HS1 289 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 EGLN2Q96KS0 407 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 OR52B2Q96RD2 323 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CSF3RQ99062 836 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KLF6Q99612 283 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 C11orf70Q9BRQ4 267 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TMEM79Q9BSE2 394 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ZNF577Q9BSK1 485 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FEM1AQ9BSK4 669 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CNPY3Q9BT09 278 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TRMOQ9BU70 441 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SLC25A23Q9BV35 468 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 APOL6Q9BWW8 343 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 OSBPL10Q9BXB5 764 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 OR2B2Q9GZK3 357 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SNX25Q9H3E2 840 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SMARCAD1Q9H4L7 1026 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CXorf36Q9H7Y0 433 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SFXN1Q9H9B4 322 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 LIN28AQ9H9Z2 209 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 MEAF6Q9HAF1 191 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SIAEQ9HAT2 523 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 C12orf10Q9HB07 376 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 HMG20AQ9NP66 347 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SPAG4Q9NPE6 437 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SLC52A3Q9NQ40 469 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CCDC177Q9NQR7 707 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 ENTPD7Q9NQZ7 604 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 GIMAP4Q9NUV9 329 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FBXO28Q9NVF7 368 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TBC1D13Q9NVG8 400 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 INTS10Q9NVR2 710 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 ASNSD1Q9NWL6 643 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TRNAU1APQ9NX07 287 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 GDAP2Q9NXN4 497 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ALKBH4Q9NXW9 302 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 RBAKQ9NYW8 714 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 IL20Q9NYY1 176 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 USE1Q9NZ43 259 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TMEM216Q9P0N5 145 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ACTR3BQ9P1U1 418 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SLC9A2Q9UBY0 812 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SLCO3A1Q9UIG8 710 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ENPP5Q9UJA9 477 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ANAPC2Q9UJX6 822 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KIAA1257Q9ULG3 409 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 NDRG4Q9ULP0 352 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 EIF3LQ9Y262 564 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 CARD8Q9Y2G2 431 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CCL27Q9Y4X3 112 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 HSPE1-MOB4S4R3N1 261 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 NRCAMQ92823 1304 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ADAMTS9Q9P2N4 1935 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 PCDH15Q96QU1 1955 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ABCA7Q8IZY2 2146 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FLNAP21333 2647 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 NSD1Q96L73 2696 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 ACANP16112 2415 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 ARHGEF17Q96PE2 2063 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 THADAQ6YHU6 1953 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 ZCWPW2A0A1B0GU75 182 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 A0A1W2PS29 197 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 HEATR9A2RTY3 570 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 SH3D21A4FU49 640 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 DRGXA6NNA5 263 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 ERI2A8K979 691 aaKnown RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 MEI4A8MW99 385 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 A8MXE2 369 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 EVPLLA8MZ36 301 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 MYO1GB0I1T2 1018 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 GOLGA8MH3BSY2 632 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 HAS3O00219 553 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 UPK1AO00322 258 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 SOCS2O14508 198 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 SDHDO14521 159 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 AIM2O14862 343 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 XPO1O14980 1071 aaKnown RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 MED7O43513 233 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 DFNA5O60443 496 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 DPM1O60762 260 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 BCAS1O75363 584 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 BANF1O75531 89 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 LYPLA1O75608 230 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 CNTN5O94779 1100 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 DDHD2O94830 711 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 MYO1DO94832 1006 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 VAPBO95292 243 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 WISP3O95389 354 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 PTTG1O95997 202 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 CCNE2O96020 404 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 PLATP00750 562 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms