RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RBCK1Q9BYM8 510 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 TRIM55Q9BYV6 548 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 CENPHQ9H3R5 247 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 SNX6Q9UNH7 406 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 PIEZO2Q9H5I5 2752 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 ATRXP46100 2492 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 SMG1Q96Q15 3661 aaKnown RBP19.16■□□□□ 0.66
SKA3-205ENST00000465471 RTCAO00442 366 aaKnown RBP19.15■□□□□ 0.66
SKA3-205ENST00000465471 ALOX12BO75342 701 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 SH3BGRLO75368 114 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 HIST1H1TP22492 207 aaPredicted RBP19.15■□□□□ 0.66
SKA3-205ENST00000465471 RRADP55042 308 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 RAB38P57729 211 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 DCAF10Q5QP82 559 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 TTC19Q6DKK2 380 aaPredicted RBP19.15■□□□□ 0.66
SKA3-205ENST00000465471 EXD3Q8N9H8 876 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 ACOT4Q8N9L9 421 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 PLPP5Q8NEB5 264 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 OR6Y1Q8NGX8 325 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 ADAMTS18Q8TE60 1221 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 RGMAQ96B86 450 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 ZBTB9Q96C00 473 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 BBC3Q96PG8 261 aaPredicted RBP19.15■□□□□ 0.66
SKA3-205ENST00000465471 SERPINI1Q99574 410 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 MECRQ9BV79 373 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 ING2Q9H160 280 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 ADNPQ9H2P0 1102 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 ELOVL6Q9H5J4 265 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 COPS7BQ9H9Q2 264 aaPredicted RBP19.15■□□□□ 0.66
SKA3-205ENST00000465471 BRF2Q9HAW0 419 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 TMBIM4Q9HC24 238 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 LYRM4Q9HD34 91 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 FARSBQ9NSD9 589 aaKnown RBP19.15■□□□□ 0.66
SKA3-205ENST00000465471 KCMF1Q9P0J7 381 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 TUBD1Q9UJT1 453 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 DAPP1Q9UN19 280 aa19.15■□□□□ 0.66
SKA3-205ENST00000465471 SAP18O00422 153 aaKnown RBP19.14■□□□□ 0.65
SKA3-205ENST00000465471 MANBAO00462 879 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 PEX12O00623 359 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 TM9SF1O15321 606 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 CEACAM4O75871 244 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 PDYNP01213 254 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 BPGMP07738 259 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 FAM87AP0C7U9 286 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 DHRS4L1P0CG22 281 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 COX6A1P12074 109 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 ACPPP15309 386 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 JAK1P23458 1154 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 BSGP35613 385 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 LIM2P55344 173 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 ZNF33BQ06732 778 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 ASPHQ12797 758 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 MPP2Q14168 576 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 AP5B1Q2VPB7 878 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 MINDY4Q4G0A6 757 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 CFAP157Q5JU67 520 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 TCHHL1Q5QJ38 904 aaPredicted RBP19.14■□□□□ 0.65
SKA3-205ENST00000465471 OR4C11Q6IEV9 310 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 QSOX2Q6ZRP7 698 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 ZCCHC7Q8N3Z6 543 aaKnown RBP19.14■□□□□ 0.65
SKA3-205ENST00000465471 SELENOMQ8WWX9 145 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 TLCD1Q96CP7 247 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 MTFMTQ96DP5 389 aaKnown RBP19.14■□□□□ 0.65
SKA3-205ENST00000465471 FER1L6-AS2Q96M78 137 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 CENPKQ9BS16 269 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 TRMOQ9BU70 441 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 SORBS1Q9BX66 1292 aaKnown RBP19.14■□□□□ 0.65
SKA3-205ENST00000465471 STMN4Q9H169 189 aaPredicted RBP19.14■□□□□ 0.65
SKA3-205ENST00000465471 MID1IP1Q9NPA3 183 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 ARGLU1Q9NWB6 273 aaPredicted RBP19.14■□□□□ 0.65
SKA3-205ENST00000465471 FBXL4Q9UKA2 621 aa19.14■□□□□ 0.65
SKA3-205ENST00000465471 IGKV3D-11A0A0A0MRZ8 115 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 OR2W5A6NFC9 320 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 CYR61O00622 381 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 DNAJB5O75953 348 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 KRT6AP02538 564 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 KRT6BP04259 564 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 C8orf89P0DMQ9 161 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 HSD3B1P14060 373 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 HSD3B2P26439 372 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 SSR2P43308 183 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 KRT6CP48668 564 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 RAP1GDS1P52306 607 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 SOX8P57073 446 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 CHAF1BQ13112 559 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 METTL6Q8TCB7 284 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 C8orf44Q96CB5 159 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 VPS50Q96JG6 964 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 CNDP1Q96KN2 507 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 KCNA7Q96RP8 456 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 DDX31Q9H8H2 851 aaKnown RBP19.13■□□□□ 0.65
SKA3-205ENST00000465471 TNFRSF12AQ9NP84 129 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 SCN2AQ99250 2005 aa19.13■□□□□ 0.65
SKA3-205ENST00000465471 TLN1Q9Y490 2541 aaKnown RBP19.12■□□□□ 0.65
SKA3-205ENST00000465471 IGHV1-45A0A0A0MS14 117 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 A0A0A6YYD5 115 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 SERTM1A2A2V5 107 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 FAM227AF5H4B4 570 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 NPHS1O60500 1241 aa19.12■□□□□ 0.65
SKA3-205ENST00000465471 CDC123O75794 336 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms