RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 PI15O43692 258 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 TIMP1P01033 207 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 POU2F1P14859 743 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 CTSKP43235 329 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 TMIGD1Q6UXZ0 262 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 ARMC8Q8IUR7 673 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 RBM12BQ8IXT5 1001 aaKnown RBP17.52■□□□□ 0.4
SYNE4-204ENST00000465425 ZNF740Q8NDX6 193 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 DENND6BQ8NEG7 585 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 ING5Q8WYH8 240 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 ZNF514Q96K75 400 aaPredicted RBP17.52■□□□□ 0.4
SYNE4-204ENST00000465425 DACH2Q96NX9 599 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 NEURL2Q9BR09 285 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 DSN1Q9H410 356 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 ANKHQ9HCJ1 492 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 GPR83Q9NYM4 423 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 DUSP12Q9UNI6 340 aa17.52■□□□□ 0.4
SYNE4-204ENST00000465425 KRBA1A5PL33 1030 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 A8MVJ9 347 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 LZTS3O60299 673 aaPredicted RBP17.52■□□□□ 0.39
SYNE4-204ENST00000465425 POP7O75817 140 aaKnown RBP17.52■□□□□ 0.39
SYNE4-204ENST00000465425 GADD45GO95257 159 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 LINC00271P0C7V0 271 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 ADH5P11766 374 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 SLC19A1P41440 591 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 FOXD4Q12950 439 aaPredicted RBP17.52■□□□□ 0.39
SYNE4-204ENST00000465425 NFE2L1Q14494 772 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 GANABQ14697 944 aaKnown RBP17.52■□□□□ 0.39
SYNE4-204ENST00000465425 PRAMEF14Q5SWL7 426 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 PRAMEF13Q5VWM6 474 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 UNC5DQ6UXZ4 953 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 IKBIPQ70UQ0 350 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 MRPL43Q8N983 215 aaKnown RBP17.52■□□□□ 0.39
SYNE4-204ENST00000465425 ZNF675Q8TD23 568 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 SLC6A16Q9GZN6 736 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 DPEP2Q9H4A9 486 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 ENOPH1Q9UHY7 261 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 ASF1AQ9Y294 204 aa17.52■□□□□ 0.39
SYNE4-204ENST00000465425 PRAMEF25A6NGN4 478 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 ALOX5P09917 674 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 ARAFP10398 606 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 VASPP50552 380 aaPredicted RBP17.51■□□□□ 0.39
SYNE4-204ENST00000465425 EEF1A2Q05639 463 aaKnown RBP17.51■□□□□ 0.39
SYNE4-204ENST00000465425 PRSS36Q5K4E3 855 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 LRRC56Q8IYG6 542 aaPredicted RBP17.51■□□□□ 0.39
SYNE4-204ENST00000465425 TAGAPQ8N103 731 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 KRT78Q8N1N4 520 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 WFIKKN2Q8TEU8 576 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 GTPBP3Q969Y2 492 aaKnown RBP17.51■□□□□ 0.39
SYNE4-204ENST00000465425 FAM129BQ96TA1 746 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 NLNQ9BYT8 704 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 SAGE1Q9NXZ1 904 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 HCN4Q9Y3Q4 1203 aa17.51■□□□□ 0.39
SYNE4-204ENST00000465425 PRAMEF33A0A0G2JMD5 474 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 C17orf113A0A1B0GUU1 675 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ZSCAN9O15535 394 aaPredicted RBP17.5■□□□□ 0.39
SYNE4-204ENST00000465425 PRAMEF10O60809 474 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 CCNB2O95067 398 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 C6P13671 934 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 XCR1P46094 333 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 CDC42P60953 191 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 DSTNP60981 165 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 IFITM3Q01628 133 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 SLC30A8Q8IWU4 369 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 C2orf73Q8N5S3 287 aaPredicted RBP17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ZBTB8BQ8NAP8 495 aaPredicted RBP17.5■□□□□ 0.39
SYNE4-204ENST00000465425 SETD7Q8WTS6 366 aaKnown RBP17.5■□□□□ 0.39
SYNE4-204ENST00000465425 COL21A1Q96P44 957 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ACAT2Q9BWD1 397 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 BTBD2Q9BX70 525 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 AHSPQ9NZD4 102 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 TRBC2A0A5B9 178 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 M0R082 166 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 PCDH17O14917 1159 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 SPINT1O43278 529 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 IFNW1P05000 195 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 CYP17A1P05093 508 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 CISD3P0C7P0 127 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 UQCRC2P22695 453 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 GADD45AP24522 165 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ITGB7P26010 798 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 PCBP3P57721 371 aaKnown RBP17.5■□□□□ 0.39
SYNE4-204ENST00000465425 TEKQ02763 1124 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 FPGSQ05932 587 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ST3GAL4Q11206 333 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 CBX3Q13185 183 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ZNF404Q494X3 552 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 FBXO43Q4G163 708 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 FAM180BQ6P0A1 224 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 USP43Q70EL4 1123 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 GRASPQ7Z6J2 395 aaPredicted RBP17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ZNF547Q8IVP9 402 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 OR2L2Q8NH16 312 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 IL17FQ96PD4 163 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ACER3Q9NUN7 267 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 FKBP14Q9NWM8 211 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ZNF226Q9NYT6 803 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 ENPP4Q9Y6X5 453 aa17.5■□□□□ 0.39
SYNE4-204ENST00000465425 MMP20O60882 483 aa17.49■□□□□ 0.39
SYNE4-204ENST00000465425 KLHL18O94889 574 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms