RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 TSPAN12O95859 305 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 MPIP34949 423 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 STXBP1P61764 594 aaKnown RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 SMN1Q16637 294 aaKnown RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 RNASE12Q5GAN4 147 aaKnown RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 OR9Q2Q8NGE9 314 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 TFAP2CQ92754 450 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 CHFRQ96EP1 664 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 DTD2Q96FN9 168 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 Q96MT0 163 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 FAM129BQ96TA1 746 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 SLC2A11Q9BYW1 496 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 NAA50Q9GZZ1 169 aaKnown RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 P2RY12Q9H244 342 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 TBC1D17Q9HA65 648 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 PREBQ9HCU5 417 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 TM9SF3Q9HD45 589 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 ABCG2Q9UNQ0 655 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 NEU3Q9UQ49 428 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 PCDHGA8Q9Y5G5 932 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 PCDHA9Q9Y5H5 950 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 FXYD1O00168 92 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 SCAMP2O15127 329 aaKnown RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 CAPN5O15484 640 aaPredicted RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 B4GALT2O60909 372 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 MT-ND2P03891 347 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 ANXA8P13928 327 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 SLAMF1Q13291 335 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 EXOC3L2Q2M3D2 409 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 KIAA1614Q5VZ46 1190 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 HMBOX1Q6NT76 420 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 ZNF773Q6PK81 442 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 USP30Q70CQ3 517 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 OLIG3Q7RTU3 272 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 TCEANCQ8N8B7 351 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 COX18Q8N8Q8 333 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 FAR1Q8WVX9 515 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 GEMIN6Q8WXD5 167 aaKnown RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 EZH1Q92800 747 aaPredicted RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 TADA1Q96BN2 335 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 RIPOR3Q96MK2 946 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 GAL3ST4Q96RP7 486 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 POLR2J2Q9GZM3 115 aaKnown RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 PCBD2Q9H0N5 130 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 IKZF5Q9H5V7 419 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 KAT8Q9H7Z6 458 aaKnown RBP12.3□□□□□ -0.44
NFXL1-203ENST00000464756 ZNF225Q9UK10 706 aa12.3□□□□□ -0.44
NFXL1-203ENST00000464756 PRRT4C9JH25 899 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 INMTO95050 263 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 H1F0P07305 194 aaKnown RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 PIM1P11309 404 aaPredicted RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 CKMT1AP12532 417 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 IMPA1P29218 277 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 GNA13Q14344 377 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 PRRT3Q5FWE3 981 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 COQ5Q5HYK3 327 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 PRR23BQ6ZRT6 265 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 ANKRD33Q7Z3H0 272 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 C6orf120Q7Z4R8 191 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 TMEM126BQ8IUX1 230 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 PHF21AQ96BD5 680 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 FCRL4Q96PJ5 515 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 CPEB1Q9BZB8 566 aaKnown RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 ZNF696Q9H7X3 374 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 TIMMDC1Q9NPL8 285 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 SNTG1Q9NSN8 517 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 H7C0S8 307 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 BTN3A3O00478 584 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 ABCB7O75027 752 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 XKP51811 444 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 SIM1P81133 766 aaPredicted RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 RUNDC3AQ59EK9 446 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 SLC35F1Q5T1Q4 408 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 REEP3Q6NUK4 255 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 FBXO15Q8NCQ5 510 aaPredicted RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 KBTBD8Q8NFY9 601 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 GRHL3Q8TE85 626 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 C16orf78Q8WTQ4 265 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 ARRDC3Q96B67 414 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 GPATCH1Q9BRR8 931 aaKnown RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 TTTY10Q9BZA0 68 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 RNGTTO60942 597 aaKnown RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 PRG2P13727 222 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 HBA1P69905 142 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 COLEC12Q5KU26 742 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 TMEM107Q6UX40 140 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 SLC5A8Q8N695 610 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 OR5D16Q8NGK9 328 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 PMEPA1Q969W9 287 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 ISG20Q96AZ6 181 aaKnown RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 PDLIM5Q96HC4 596 aaKnown RBP12.29□□□□□ -0.44
NFXL1-203ENST00000464756 ANKRD60Q9BZ19 345 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 ZDHHC7Q9NXF8 308 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 ST14Q9Y5Y6 855 aa12.29□□□□□ -0.44
NFXL1-203ENST00000464756 AHCTF1Q8WYP5 2266 aa12.28□□□□□ -0.44
NFXL1-203ENST00000464756 LINC01553A4QN01 128 aa12.28□□□□□ -0.44
NFXL1-203ENST00000464756 SCN2BO60939 215 aa12.28□□□□□ -0.44
NFXL1-203ENST00000464756 HLA-DQA2P01906 255 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms