RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 STMN4Q9H169 189 aaPredicted RBP13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 MID1IP1Q9NPA3 183 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 ARGLU1Q9NWB6 273 aaPredicted RBP13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 ACTL7BQ9Y614 415 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 MED13Q9UHV7 2174 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 PCSK5Q92824 1860 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 OR2W5A6NFC9 320 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 GOLGA6L10A6NI86 522 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 RTCAO00442 366 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 UBFD1O14562 309 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 ATXN7O15265 892 aaPredicted RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 B4GALT2O60909 372 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 CDC123O75794 336 aaPredicted RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 PDYNP01213 254 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 KRT6AP02538 564 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 KRT6BP04259 564 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 ENO1P06733 434 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 C8orf89P0DMQ9 161 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 ACPPP15309 386 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 HIST1H1TP22492 207 aaPredicted RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 CERS1P27544 350 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 SSR2P43308 183 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 TSFMP43897 325 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 KRT6CP48668 564 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 CCL11P51671 97 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 EFNA3P52797 238 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 CHAF1BQ13112 559 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 TUBB8Q3ZCM7 444 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 DCAF10Q5QP82 559 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 CPZQ66K79 652 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 OR4C11Q6IEV9 310 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 TMEM205Q6UW68 189 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 ZNF793Q6ZN11 406 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 EXD3Q8N9H8 876 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 ACOT4Q8N9L9 421 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 LSM14AQ8ND56 463 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 PLPP5Q8NEB5 264 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 OR11G2Q8NGC1 345 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 AGAP11Q8TF27 550 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 SELENOMQ8WWX9 145 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 C8orf44Q96CB5 159 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 SERPINI1Q99574 410 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 GATA5Q9BWX5 397 aaPredicted RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 TRIM55Q9BYV6 548 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 SLC29A3Q9BZD2 475 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 ADNPQ9H2P0 1102 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 LANCL2Q9NS86 450 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 FARSBQ9NSD9 589 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 FBXL4Q9UKA2 621 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 RALYQ9UKM9 306 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 DAPP1Q9UN19 280 aa13.68□□□□□ -0.22
SQSTM1-205ENST00000464493 FAM227AF5H4B4 570 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 H3BQF6 201 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 MANBAO00462 879 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 PLPP1O14494 284 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 ULK1O75385 1050 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 DNAJB5O75953 348 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 SCELO95171 688 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 ETHE1O95571 254 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 SFTPCP11686 197 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 HMOX2P30519 316 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 ETV4P43268 484 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 LIM2P55344 173 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 RAB38P57729 211 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 RHAGQ02094 409 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 KCNAB2Q13303 367 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 LY6DQ14210 128 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 RCN2Q14257 317 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 CLEC1AQ8NC01 280 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 SREK1Q8WXA9 508 aaKnown RBP13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 CNDP1Q96KN2 507 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 MESP1Q9BRJ9 268 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 MECRQ9BV79 373 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 SORBS1Q9BX66 1292 aaKnown RBP13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 BRF2Q9HAW0 419 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 TMBIM4Q9HC24 238 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 LYRM4Q9HD34 91 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 KCNK9Q9NPC2 374 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 ATP13A2Q9NQ11 1180 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 NUP210LQ5VU65 1888 aa13.67□□□□□ -0.22
SQSTM1-205ENST00000464493 LOC102723996A0A087X1L8 192 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 MKRN2OSH3BPM6 223 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 TM9SF1O15321 606 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 PRMT3O60678 531 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 SEMA3DO95025 777 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 BPGMP07738 259 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 H2AFXP16104 143 aaPredicted RBP13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 BTG2P78543 158 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 AIMP2Q13155 320 aaKnown RBP13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 SLAMF1Q13291 335 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 ABRAXAS2Q15018 415 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 NSDHLQ15738 373 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 TCHHL1Q5QJ38 904 aaPredicted RBP13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 FAM219BQ5XKK7 198 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 QSOX2Q6ZRP7 698 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 NDUFAF7Q7L592 441 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 ZCCHC7Q8N3Z6 543 aaKnown RBP13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 ADAMTS18Q8TE60 1221 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 PTCHD1Q96NR3 888 aa13.66□□□□□ -0.22
SQSTM1-205ENST00000464493 BBC3Q96PG8 261 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms