RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 IFNA7P01567 189 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 HLA-DQB1P01920 261 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 RPLP1P05386 114 aaKnown RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 GSTM1P09488 218 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 NR2F6P10588 404 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 ACADMP11310 421 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 PEPDP12955 493 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 GABRB1P18505 474 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 MYL12AP19105 171 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TACR2P21452 398 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 PRKACBP22694 351 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 CHMP24386 653 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 MZF1P28698 734 aaPredicted RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 C21orf33P30042 268 aaPredicted RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 CA8P35219 290 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 ADCYAP1R1P41586 468 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 GSTM5P46439 218 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 EIF1AXP47813 144 aaKnown RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 HMGA2P52926 109 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 MRPS6P82932 125 aaKnown RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 DAB2P98082 770 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 VLDLRP98155 873 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 SPIBQ01892 262 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 DSC3Q14574 896 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 LARS2Q15031 903 aaKnown RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 SMN1Q16637 294 aaKnown RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 DUSP6Q16828 381 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 COL28A1Q2UY09 1125 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TIGD5Q53EQ6 642 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 SMUG1Q53HV7 270 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 PYDC2Q56P42 97 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 CEP78Q5JTW2 689 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TMEM201Q5SNT2 666 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 GCNT6Q5T4J0 391 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 CPTPQ5TA50 214 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 FAM171A1Q5VUB5 890 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 LIPJQ5W064 366 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 RAP1GAP2Q684P5 730 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 NOXRED1Q6NXP6 359 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 Q6ZS46 218 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 RFPL4BQ6ZWI9 263 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 IKBIPQ70UQ0 350 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 CHST9Q7L1S5 443 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 CAMKMTQ7Z624 323 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 SCN4BQ8IWT1 228 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TAGAPQ8N103 731 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 LGI4Q8N135 537 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 LRRC17Q8N6Y2 441 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 NAT16Q8N8M0 369 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 L3MBTL4Q8NA19 623 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 PLA2G15Q8NCC3 412 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 DUSP18Q8NEJ0 188 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 B3GNT7Q8NFL0 401 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TOR1AIP2Q8NFQ8 470 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 UTP15Q8TED0 518 aaKnown RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 UBASH3BQ8TF42 649 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 DEDD2Q8WXF8 326 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 AKAP1Q92667 903 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC25A46Q96AG3 418 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 DIRAS2Q96HU8 199 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 PPP1R16AQ96I34 528 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 EXOC2Q96KP1 924 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 KCNC2Q96PR1 638 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 KCNS3Q9BQ31 491 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TTYH2Q9BSA4 534 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TTPALQ9BTX7 342 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 CNPPD1Q9BV87 410 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 GPR63Q9BZJ6 419 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 AP5M1Q9H0R1 490 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 CXCL16Q9H2A7 254 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TNKS2Q9H2K2 1166 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 NSUN3Q9H649 340 aaKnown RBP6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TPT1P8Q9HAU6 139 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TRIM39Q9HCM9 518 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 LTB4R2Q9NPC1 389 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 ERVK13-1Q9NX77 482 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 VNN3Q9NY84 501 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 GPR83Q9NYM4 423 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TAS2R7Q9NYW3 318 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 TNFRSF10DQ9UBN6 386 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 GULP1Q9UBP9 304 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 GJD2Q9UKL4 321 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 MGAT4BQ9UQ53 548 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 ZNF451Q9Y4E5 1061 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 RAI2Q9Y5P3 530 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 SNX8Q9Y5X2 465 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 V9GYH0 126 aa6.9□□□□□ -1.3
CLSTN1-204ENST00000464286 EP400Q96L91 3159 aa6.9□□□□□ -1.31
CLSTN1-204ENST00000464286 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 SCO2A0A1W2PP80 73 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 CARNS1A5YM72 827 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 LINC00862A6NCI5 91 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 OR5K3A6NET4 321 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 ARL5CA6NH57 179 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 FAM170BA6NMN3 283 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 ZAR1LA6NP61 321 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 B4DXG7 233 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 SGK494L7N484 410 aa6.89□□□□□ -1.31
CLSTN1-204ENST00000464286 SCAMP3O14828 347 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms