RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.05■□□□□ 0.96
USP4-208ENST00000464168 RPRMLQ8N4K4 120 aa21.05■□□□□ 0.96
USP4-208ENST00000464168 TMEM52Q8NDY8 209 aa21.05■□□□□ 0.96
USP4-208ENST00000464168 GAL3ST3Q96A11 431 aa21.05■□□□□ 0.96
USP4-208ENST00000464168 DEFB127Q9H1M4 99 aa21.05■□□□□ 0.96
USP4-208ENST00000464168 TP63Q9H3D4 680 aaPredicted RBP21.05■□□□□ 0.96
USP4-208ENST00000464168 TIMMDC1Q9NPL8 285 aa21.05■□□□□ 0.96
USP4-208ENST00000464168 ASIC3Q9UHC3 531 aa21.05■□□□□ 0.96
USP4-208ENST00000464168 YARS2Q9Y2Z4 477 aaKnown RBP21.05■□□□□ 0.96
USP4-208ENST00000464168 DNAJC13O75165 2243 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 NKX2-6A6NCS4 301 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 USP27XA6NNY8 438 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 TUBB4AP04350 444 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 ZNF37AP17032 561 aaPredicted RBP21.04■□□□□ 0.96
USP4-208ENST00000464168 IVDP26440 423 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 HNRNPH1P31943 449 aaKnown RBP21.04■□□□□ 0.96
USP4-208ENST00000464168 HSD17B7P56937 341 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 XKR6Q5GH73 641 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 SLCO4C1Q6ZQN7 724 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 ANKRD7Q92527 254 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 RND1Q92730 232 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 MS4A6EQ96DS6 147 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 CFAP36Q96G28 342 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 FAR2Q96K12 515 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 PWWP2AQ96N64 755 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 WDR83Q9BRX9 315 aaKnown RBP21.04■□□□□ 0.96
USP4-208ENST00000464168 NPLQ9BXD5 320 aaPredicted RBP21.04■□□□□ 0.96
USP4-208ENST00000464168 LIN28AQ9H9Z2 209 aaKnown RBP21.04■□□□□ 0.96
USP4-208ENST00000464168 PRTFDC1Q9NRG1 225 aa21.04■□□□□ 0.96
USP4-208ENST00000464168 GOLGA6L10A0A0M3HER8 536 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 PINLYPA6NC86 204 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 LRIT2A6NDA9 550 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 NPEPPSL1A6NEC2 478 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 CLDN4O14493 209 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 OR2J2O76002 312 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 ZFAND5O76080 213 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 C1GALT1C1LP0DN25 315 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 SAT1P21673 171 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 ELK3P41970 407 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 GDF5P43026 501 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 CDKL1Q00532 357 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 PMPCAQ10713 525 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 C18orf21Q32NC0 220 aaPredicted RBP21.03■□□□□ 0.96
USP4-208ENST00000464168 CCDC71Q8IV32 467 aaPredicted RBP21.03■□□□□ 0.96
USP4-208ENST00000464168 KLHDC8AQ8IYD2 350 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 PSD4Q8NDX1 1056 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 QRFPRQ96P65 431 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 OSBPL9Q96SU4 736 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 CCDC77Q9BR77 488 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 KCNJ16Q9NPI9 418 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 ERVK-11Q9UQG0 969 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 PSAT1Q9Y617 370 aa21.03■□□□□ 0.96
USP4-208ENST00000464168 FAM90A27PA6NNH2 459 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 ERI3O43414 337 aaKnown RBP21.02■□□□□ 0.96
USP4-208ENST00000464168 H2AFYO75367 372 aaKnown RBP21.02■□□□□ 0.96
USP4-208ENST00000464168 GNAZP19086 355 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 HNMTP50135 292 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 RAB38P57729 211 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 PPIAP62937 165 aaKnown RBP21.02■□□□□ 0.96
USP4-208ENST00000464168 SLC13A2Q13183 592 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 STEAP4Q687X5 459 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 TMIGD1Q6UXZ0 262 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 DMRTC2Q8IXT2 367 aaPredicted RBP21.02■□□□□ 0.96
USP4-208ENST00000464168 NKAPQ8N5F7 415 aaKnown RBP21.02■□□□□ 0.96
USP4-208ENST00000464168 TTLQ8NG68 377 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 OR2M7Q8NG81 312 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 EGFL8Q99944 293 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 ADAP2Q9NPF8 381 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 MYOTQ9UBF9 498 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 TNFRSF10DQ9UBN6 386 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 CHMP2BQ9UQN3 213 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 OARD1Q9Y530 152 aa21.02■□□□□ 0.96
USP4-208ENST00000464168 A8MVJ9 347 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 FOXO6A8MYZ6 492 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 KRT38O76015 456 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 OR6B1O95007 311 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 TBX6O95947 436 aaPredicted RBP21.01■□□□□ 0.95
USP4-208ENST00000464168 MSX1P28360 303 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 SLBPQ14493 270 aaKnown RBP eCLIP21.01■□□□□ 0.95
USP4-208ENST00000464168 ZNF460Q14592 562 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 IL20RBQ6UXL0 311 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 GPALPP1Q8IXQ4 340 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 ZNF595Q8IYB9 648 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 PDIK1LQ8N165 341 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 FAM47BQ8NA70 645 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 SEC16BQ96JE7 1060 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 DDX47Q9H0S4 455 aaKnown RBP21.01■□□□□ 0.95
USP4-208ENST00000464168 ZDHHC11Q9H8X9 412 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 HPF1Q9NWY4 346 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 TEX264Q9Y6I9 313 aa21.01■□□□□ 0.95
USP4-208ENST00000464168 NIPBLQ6KC79 2804 aaeCLIP21.01■□□□□ 0.95
USP4-208ENST00000464168 A0A0G2JMM0 328 aa21■□□□□ 0.95
USP4-208ENST00000464168 A0A1W2PPB8 328 aa21■□□□□ 0.95
USP4-208ENST00000464168 A0A1W2PRS3 328 aa21■□□□□ 0.95
USP4-208ENST00000464168 FAM166BA8MTA8 275 aa21■□□□□ 0.95
USP4-208ENST00000464168 KIR3DP1A8MWS1 328 aa21■□□□□ 0.95
USP4-208ENST00000464168 CYR61O00622 381 aa21■□□□□ 0.95
USP4-208ENST00000464168 B3GALT2O43825 422 aa21■□□□□ 0.95
USP4-208ENST00000464168 WDR47O94967 919 aa21■□□□□ 0.95
USP4-208ENST00000464168 SLC6A12P48065 614 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms