RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RFC4P35249 363 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 OR1G1P47890 313 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 KRT6CP48668 564 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 CDR2Q01850 454 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 TNFRSF17Q02223 184 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 LGALS3BPQ08380 585 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 GIT2Q14161 759 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 KRT33BQ14525 404 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 EFTUD2Q15029 972 aaKnown RBP eCLIP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 P2RY6Q15077 328 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 ZMYND11Q15326 602 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 LRRC23Q53EV4 343 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 NOTUMQ6P988 496 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 DOK6Q6PKX4 331 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 ZNF573Q86YE8 665 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 SLC22A9Q8IVM8 553 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 AQP12AQ8IXF9 295 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 NIPA2Q8N8Q9 360 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 RASGEF1AQ8N9B8 481 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 ZNF383Q8NA42 475 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 MNS1Q8NEH6 495 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 TMEM185AQ8NFB2 350 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 OR52K1Q8NGK4 314 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 RIT1Q92963 219 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 AZIN2Q96A70 460 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 MOAP1Q96BY2 351 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 AP2M1Q96CW1 435 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 C14orf79Q96F83 325 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 NSL1Q96IY1 281 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 ZNF300Q96RE9 604 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 BCL7BQ9BQE9 202 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 CCDC77Q9BR77 488 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 POLR1EQ9GZS1 481 aaKnown RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 LRRC40Q9H9A6 602 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 RPRD1BQ9NQG5 326 aaKnown RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 UTP6Q9NYH9 597 aaKnown RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 BAIAP2L1Q9UHR4 511 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 RNF150Q9ULK6 438 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 CHTOPQ9Y3Y2 248 aaKnown RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 ZHX2Q9Y6X8 837 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 U3KQV3 271 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 UNC13AQ9UPW8 1703 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 GOLGA6L7A0A1B0GV03 622 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 E9PBE3 544 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 H0YIG0 161 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 H0YIV9 168 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 L7N2F9 121 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 CLDN3O15551 220 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SURF6O75683 361 aaKnown RBP3.57□□□□□ -1.84
ITGB1-208ENST00000464001 CDC123O75794 336 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-208ENST00000464001 POLR2MP0CAP2 368 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 CDH3P22223 829 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 GALP22466 123 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 CYP2F1P24903 491 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 PTPN6P29350 595 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SHC1P29353 583 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 MAGEB1P43366 347 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 PRRX1P54821 245 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SPIBQ01892 262 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 PDZK1IP1Q13113 114 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 GPR17Q13304 367 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 TNK1Q13470 666 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 HNRNPDQ14103 355 aaKnown RBP3.57□□□□□ -1.84
ITGB1-208ENST00000464001 MAPK11Q15759 364 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 UGCGQ16739 394 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 CDO1Q16878 200 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SGSM1Q2NKQ1 1148 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SNAI3Q3KNW1 292 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 FAM98BQ52LJ0 330 aaKnown RBP3.57□□□□□ -1.84
ITGB1-208ENST00000464001 CFAP157Q5JU67 520 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 LDLRAP1Q5SW96 308 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 TXNRD3NBQ6F5E7 133 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 MROH5Q6ZUA9 1318 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 TAS2R42Q7RTR8 314 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SIAH3Q8IW03 269 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 LSMEM2Q8N112 164 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 BBS5Q8N3I7 341 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 ZNF843Q8N446 348 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 DCLK2Q8N568 766 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 OR2T3Q8NH03 318 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SUSD6Q92537 303 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 RAD54LQ92698 747 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 FAM46BQ96A09 425 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 ESAMQ96AP7 390 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SGF29Q96ES7 293 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 OTUB1Q96FW1 271 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-208ENST00000464001 PRICKLE1Q96MT3 831 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-208ENST00000464001 PSKH2Q96QS6 385 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 MYADMQ96S97 322 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 GON7Q9BXV9 100 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 GPR61Q9BZJ8 451 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 SLC7A5P2Q9GIP4 190 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 LAT2Q9GZY6 243 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 LSG1Q9H089 658 aaKnown RBP3.57□□□□□ -1.84
ITGB1-208ENST00000464001 WNT5BQ9H1J7 359 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 EHD1Q9H4M9 534 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 VCPKMTQ9H867 229 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 EQTNQ9NQ60 294 aa3.57□□□□□ -1.84
ITGB1-208ENST00000464001 HPS4Q9NQG7 708 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms