RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FBXO30Q8TB52 745 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 HDAC2Q92769 488 aaKnown RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 GFM2Q969S9 779 aaKnown RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 AP2M1Q96CW1 435 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 CXorf40BQ96DE9 158 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 PYURFQ96I23 114 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 APOLD1Q96LR9 279 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 WDR92Q96MX6 357 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 FOPNLQ96NB1 174 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TSSK3Q96PN8 268 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 DUSP23Q9BVJ7 150 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 LGR4Q9BXB1 951 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 NPLQ9BXD5 320 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 ZCCHC2Q9C0B9 1178 aaKnown RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 WDR26Q9H7D7 661 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 SLC6A13Q9NSD5 602 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 UCKL1Q9NWZ5 548 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TOR4AQ9NXH8 423 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 NLGN3Q9NZ94 848 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 SPASTQ9UBP0 616 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 BTNL2Q9UIR0 455 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 DGKBQ9Y6T7 804 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 SPEGQ15772 3267 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TMEM202A6NGA9 273 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 SLC16A6O15403 523 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 AQP9O43315 295 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 RASGRP1O95267 797 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 SOD1P00441 154 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 MT-ND1P03886 318 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 ABCB1P08183 1280 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 MYCLP1P12525 358 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 CD22P20273 847 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 DCKP27707 260 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 IMPA1P29218 277 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 GPR1P46091 355 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 CDH15P55291 814 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 WNT3P56703 355 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 SRP54P61011 504 aaKnown RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 PLIN5Q00G26 463 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TMEM115Q12893 351 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TOP3AQ13472 1001 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TUBA3CQ13748 450 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 VEZF1Q14119 521 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 DOC2AQ14183 400 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 UGT8Q16880 541 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 SPIN4Q56A73 249 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 XKR6Q5GH73 641 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 GALNT18Q6P9A2 607 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF773Q6PK81 442 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 DNAJC14Q6Y2X3 702 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 SLCO6A1Q86UG4 719 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 PHACTR4Q8IZ21 702 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 CLEC4FQ8N1N0 589 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 FAM181AQ8N9Y4 354 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TSACCQ96A04 125 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TMIGD2Q96BF3 282 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 PYCR2Q96C36 320 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 REPS1Q96D71 796 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 NRBF2Q96F24 287 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 LINC00615Q96LM1 132 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 INPP5KQ9BT40 448 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 REXO4Q9GZR2 422 aaKnown RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 ATG10Q9H0Y0 220 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 EHD1Q9H4M9 534 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 PHPT1Q9NRX4 125 aaPredicted RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 FTSJ1Q9UET6 329 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 APOBEC3BQ9UH17 382 aaKnown RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 C3orf18Q9UK00 162 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 WASF3Q9UPY6 502 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 CORO2BQ9UQ03 480 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TSC22D4Q9Y3Q8 395 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 V9GYQ6 96 aa9.48□□□□□ -0.89
PTPRD-207ENST00000463477 TDRD6O60522 2096 aaKnown RBP9.48□□□□□ -0.89
PTPRD-207ENST00000463477 C17orf113A0A1B0GUU1 675 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 LMO7DNF2Z398 122 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 SIGLEC6O43699 453 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 DNAJB5O75953 348 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 SERPINA1P01009 418 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 TNFP01375 233 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 SEMG1P04279 462 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 FTH1P19P0C7X4 201 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ALPPL2P10696 532 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ITGAMP11215 1152 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 CDK4P11802 303 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 SOX11P35716 441 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 DCTP40126 519 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 CDKN2CP42773 168 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 CTSCP53634 463 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 NUP107P57740 925 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 SHC2P98077 582 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 CDK3Q00526 305 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ACSM2AQ08AH3 577 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ALG11Q2TAA5 492 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 PGS1Q32NB8 556 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 PROX2Q3B8N5 592 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 PRRT3Q5FWE3 981 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 OTUD3Q5T2D3 398 aaPredicted RBP9.47□□□□□ -0.89
PTPRD-207ENST00000463477 ACSM2BQ68CK6 577 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 RAET1GQ6H3X3 334 aa9.47□□□□□ -0.89
PTPRD-207ENST00000463477 OR4F3Q6IEY1 312 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms