RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 KCMF1Q9P0J7 381 aa7.14□□□□□ -1.27
SMC3-202ENST00000462899 FOXD3Q9UJU5 478 aaPredicted RBP7.14□□□□□ -1.27
SMC3-202ENST00000462899 MED16Q9Y2X0 877 aa7.14□□□□□ -1.27
SMC3-202ENST00000462899 PCDHA3Q9Y5H8 950 aa7.14□□□□□ -1.27
SMC3-202ENST00000462899 TRBV11-1A0A0K0K1C0 115 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 FAM181BA6NEQ2 426 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 ZNF839A8K0R7 811 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CLCA1A8K7I4 914 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 FAM47E-STBD1D6RA91 191 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CHST10O43529 356 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 ZNF354AO60765 605 aaPredicted RBP7.13□□□□□ -1.27
SMC3-202ENST00000462899 OR6B1O95007 311 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 B3GALT4O96024 378 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CATP04040 527 aaKnown RBP7.13□□□□□ -1.27
SMC3-202ENST00000462899 ARAFP10398 606 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 GABRA1P14867 456 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 MAOAP21397 527 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 JAK1P23458 1154 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CYLC1P35663 651 aaPredicted RBP7.13□□□□□ -1.27
SMC3-202ENST00000462899 SSR4P51571 173 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CLCN2P51788 898 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CLCN7P51798 805 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 ZNF136P52737 540 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 EIF3BP55884 814 aaKnown RBP7.13□□□□□ -1.27
SMC3-202ENST00000462899 TBPL1P62380 186 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 OLR1P78380 273 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 MEF2AQ02078 507 aaPredicted RBP7.13□□□□□ -1.27
SMC3-202ENST00000462899 HERC3Q15034 1050 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 XKR6Q5GH73 641 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CCDC181Q5TID7 509 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CYHR1Q6ZMK1 362 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 C16orf47Q6ZP98 133 aaPredicted RBP7.13□□□□□ -1.27
SMC3-202ENST00000462899 SLCO4C1Q6ZQN7 724 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 ASPGQ86U10 573 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 SLC22A16Q86VW1 577 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 SCUBE1Q8IWY4 988 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 REXO1L1PQ8IX06 675 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 ULK2Q8IYT8 1036 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 TMEM156Q8N614 296 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 GOLGA6L1Q8N7Z2 621 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 SLC13A3Q8WWT9 602 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 ASB11Q8WXH4 323 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 PTCHD1Q96NR3 888 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 PANX2Q96RD6 677 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 FAM129AQ9BZQ8 928 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 ATG10Q9H0Y0 220 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 IL1RL2Q9HB29 575 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 SH2D2AQ9NP31 389 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 CHRAC1Q9NRG0 131 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 JKAMPQ9P055 326 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 TRPS1Q9UHF7 1281 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 GDF2Q9UK05 429 aaPredicted RBP7.13□□□□□ -1.27
SMC3-202ENST00000462899 YARS2Q9Y2Z4 477 aaKnown RBP7.13□□□□□ -1.27
SMC3-202ENST00000462899 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMC3-202ENST00000462899 MEGF8Q7Z7M0 2845 aa7.13□□□□□ -1.27
SMC3-202ENST00000462899 USF3Q68DE3 2245 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 HSPB2A8KAH6 182 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 A8MVJ9 347 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 C4orf51C9J302 202 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 SLC16A5O15375 505 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 HCN1O60741 890 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 CRLF1O75462 422 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 OR2J2O76002 312 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 ESR1P03372 595 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 SLC35G6P0C7Q6 338 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 SMIM10L1P0DMW3 83 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 ALOX12P18054 663 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 BMP5P22003 454 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 ADH6P28332 368 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 TIMP3P35625 211 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 SOX3P41225 446 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 HYAL2Q12891 473 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 TSTA3Q13630 321 aaPredicted RBP7.12□□□□□ -1.27
SMC3-202ENST00000462899 HSPB2Q16082 182 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 CAPN13Q6MZZ7 669 aaPredicted RBP7.12□□□□□ -1.27
SMC3-202ENST00000462899 GK5Q6ZS86 529 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 LUZP1Q86V48 1076 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 GOLM1Q8NBJ4 401 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 MFSD9Q8NBP5 474 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 TNIP2Q8NFZ5 429 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 OR4K1Q8NGD4 311 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 PPP1R14CQ8TAE6 165 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 LINC01560Q8TB33 94 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 EDARADDQ8WWZ3 215 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 IGFBPL1Q8WX77 278 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 SMPDL3BQ92485 455 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 SARAFQ96BY9 339 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 FAM136AQ96C01 138 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 VMP1Q96GC9 406 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 SMIM10Q96HG1 83 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 CCDC42Q96M95 316 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 Q96MF0 132 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 RASL10BQ96S79 203 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 FAM173AQ9BQD7 235 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 AICDAQ9GZX7 198 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 ZNF703Q9H7S9 590 aaPredicted RBP7.12□□□□□ -1.27
SMC3-202ENST00000462899 SEMA4BQ9NPR2 832 aaPredicted RBP7.12□□□□□ -1.27
SMC3-202ENST00000462899 HPF1Q9NWY4 346 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 IFNKQ9P0W0 207 aa7.12□□□□□ -1.27
SMC3-202ENST00000462899 ZNF629Q9UEG4 869 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms