RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 TRIM40Q6P9F5 258 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 KBTBD2Q8IY47 623 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 MREGQ8N565 214 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 MYRIPQ8NFW9 859 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 M1APQ8TC57 530 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 PPP4R1Q8TF05 950 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 TSLPQ969D9 159 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 PNPLA2Q96AD5 504 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 L3HYPDHQ96EM0 354 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 THOC3Q96J01 351 aaKnown RBP9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 FAR2Q96K12 515 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 NSUN5Q96P11 429 aaKnown RBP9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 AGAP4Q96P64 663 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 TMEM109Q9BVC6 243 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 ACTR8Q9H981 624 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 LYRM4Q9HD34 91 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 DMRT3Q9NQL9 472 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 NECTIN3Q9NQS3 549 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 PRDM9Q9NQV7 894 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 TBK1Q9UHD2 729 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 RNF11Q9Y3C5 154 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 ANGPTL3Q9Y5C1 460 aa9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 HEMK1Q9Y5R4 338 aaPredicted RBP9.55□□□□□ -0.88
SPTAN1-204ENST00000461855 TNRC6AQ8NDV7 1962 aaKnown RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 SYNDIG1LA6NDD5 238 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 G3V2L1 256 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 J3QKU1 62 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 PPP6CO00743 305 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 B3GALT2O43825 422 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 PRMT3O60678 531 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ETHE1O95571 254 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 TGFB1P01137 390 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 PROCP04070 461 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 CELA2AP08217 269 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 HIST1H1TP22492 207 aaPredicted RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 PTX3P26022 381 aaPredicted RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 CRHR1P34998 444 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 LIM2P55344 173 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 HERVK_113P63132 956 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 TLE1Q04724 770 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 MFAP5Q13361 173 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 RAPSNQ13702 412 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ABRAXAS2Q15018 415 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 TERF2Q15554 542 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ZRSR2Q15696 482 aaKnown RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 EXT1Q16394 746 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 CPSF6Q16630 551 aaKnown RBP eCLIP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ERCC6LQ2NKX8 1250 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 SLC6A19Q695T7 634 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 OR4C11Q6IEV9 310 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 MRM1Q6IN84 353 aaKnown RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ISLR2Q6UXK2 745 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ZNF595Q8IYB9 648 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ARMC10Q8N2F6 343 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ZCCHC7Q8N3Z6 543 aaKnown RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 RIBC1Q8N443 379 aaPredicted RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 AMER2Q8N7J2 671 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ACOT4Q8N9L9 421 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 TMEM52Q8NDY8 209 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 NFAM1Q8NET5 270 aaPredicted RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ELP5Q8TE02 316 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 EPS8L3Q8TE67 593 aaKnown RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 CCT6BQ92526 530 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 TM9SF4Q92544 642 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 REPS1Q96D71 796 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 MAGEB10Q96LZ2 347 aaPredicted RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 PTCHD1Q96NR3 888 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 BARD1Q99728 777 aaKnown RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ERVK-6Q9BXR3 956 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 PARD6BQ9BYG5 372 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ROPN1BQ9BZX4 212 aaPredicted RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 RNF32Q9H0A6 362 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 DDX31Q9H8H2 851 aaKnown RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 ROPN1Q9HAT0 212 aaPredicted RBP9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 MMP25Q9NPA2 562 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 MKS1Q9NXB0 559 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 LGALS13Q9UHV8 139 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 B3GNT3Q9Y2A9 372 aa9.54□□□□□ -0.88
SPTAN1-204ENST00000461855 IGHV3-20A0A0C4DH32 117 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 A0A0G2JN53 185 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 BLACEA4D250 179 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 FOXO6A8MYZ6 492 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 TGFBR3LH3BV60 316 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 GOLGA8RI6L899 631 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 PLPP1O14494 284 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 CDK2AP1O14519 115 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 PLIN3O60664 434 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 B4GALT2O60909 372 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 CTNSO60931 367 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 GLRA3O75311 464 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 CDC123O75794 336 aaPredicted RBP9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 SEMA3DO95025 777 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 OTCP00480 354 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 TUBBP07437 444 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 ITGAMP11215 1152 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 PCNAP12004 261 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 TAC1P20366 129 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 CERS1P27544 350 aa9.53□□□□□ -0.88
SPTAN1-204ENST00000461855 BSGP35613 385 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms