RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ILF2Q12905 390 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 RCN2Q14257 317 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 CSHL1Q14406 222 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 ADPRMQ3LIE5 342 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 HSP90AA5PQ58FG0 334 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 PAQR3Q6TCH7 311 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 B3GNT6Q6ZMB0 384 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 CEP128Q6ZU80 1094 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 MDGA2Q7Z553 956 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 MBD6Q96DN6 1003 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 PDLIM2Q96JY6 352 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 TTTY12Q9BZ98 90 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 NECTIN3Q9NQS3 549 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 HPF1Q9NWY4 346 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 MYOTQ9UBF9 498 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 KCNE2Q9Y6J6 123 aa13.53□□□□□ -0.24
DNMT3A-207ENST00000461228 EML6Q6ZMW3 1958 aa13.52□□□□□ -0.24
DNMT3A-207ENST00000461228 NKX2-6A6NCS4 301 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 TMEM200CA6NKL6 621 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 CLDN4O14493 209 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 CDC40O60508 579 aaKnown RBP eCLIP13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 CTAG2O75638 210 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 ZFAND5O76080 213 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 KRT14P02533 472 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 CD99P14209 185 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 ZNF37AP17032 561 aaPredicted RBP13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 CDKN2DP55273 166 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 RAB38P57729 211 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 FBXL19-AS1Q494R0 122 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 SPANXN3Q5MJ09 141 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 CATSPEREQ5SY80 951 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 FAM45BPQ6NSW5 357 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 RTL4Q6ZR62 310 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 DND1Q8IYX4 353 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 RASGEF1CQ8N431 466 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 MORN4Q8NDC4 146 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 OR52N2Q8NGI0 321 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 OR5M3Q8NGP4 307 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 OR14A16Q8NHC5 309 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 DAZLQ92904 295 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 SMC6Q96SB8 1091 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 NDNQ99608 321 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 FAM173AQ9BQD7 235 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 TTYH2Q9BSA4 534 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 SPNS1Q9H2V7 528 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 EHD1Q9H4M9 534 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 DLL4Q9NR61 685 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 DEPPQ9NTK1 212 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 DYRK1BQ9Y463 629 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 FAM215AQ9Y5M1 114 aa13.52□□□□□ -0.25
DNMT3A-207ENST00000461228 GOLGA6L6A8MZA4 724 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 C4orf51C9J302 202 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 HCN1O60741 890 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 GABRA1P14867 456 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 HOXB4P17483 251 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 GABRB3P28472 473 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 ZFP36L2P47974 494 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 FNTAP49354 379 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 IST1P53990 364 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 MYBPHQ13203 477 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 PDAP1Q13442 181 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 FRG1Q14331 258 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 RIPPLY2Q5TAB7 128 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 TTC27Q6P3X3 843 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 TMPRSS11BQ86T26 416 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 PPIL6Q8IXY8 311 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 CYP4X1Q8N118 509 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 TMEM132CQ8N3T6 1108 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 RPRMLQ8N4K4 120 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 ASB15Q8WXK1 588 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 NCLNQ969V3 563 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 PYCR2Q96C36 320 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 RASL10BQ96S79 203 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 NT5DC2Q9H857 520 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 IL1RL2Q9HB29 575 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 ST6GALNAC2Q9UJ37 374 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 ERVK-11Q9UQG0 969 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 FBN3Q75N90 2809 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 EXPH5Q8NEV8 1989 aa13.51□□□□□ -0.25
DNMT3A-207ENST00000461228 CLEC3AO75596 197 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 GNAZP19086 355 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 RFC3P40938 356 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 VPS41P49754 854 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 GPR85P60893 370 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 PPIAP62937 165 aaKnown RBP13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 EFTUD2Q15029 972 aaKnown RBP eCLIP13.5□□□□□ -0.252e-9■■■■□ 22.4
DNMT3A-207ENST00000461228 RBM20Q5T481 1227 aaKnown RBP13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 NXPE4Q6UWF7 544 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 HSDL2Q6YN16 418 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 TRILQ7L0X0 811 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 CAMKMTQ7Z624 323 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 ADAMTSL2Q86TH1 951 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 GRK7Q8WTQ7 553 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 SARAFQ96BY9 339 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 CERS2Q96G23 380 aa13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 RMND5BQ96G75 393 aaPredicted RBP13.5□□□□□ -0.25
DNMT3A-207ENST00000461228 AICDAQ9GZX7 198 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms