RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 LOC390937A0A1W2PQ73 354 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 NPIPA3F8WFD2 350 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 SPRY1O43609 319 aaPredicted RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 APBB3O95704 486 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 FGF19O95750 216 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 PDGFBP01127 241 aaPredicted RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 NR2F1P10589 423 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 ACHEP22303 614 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 ACAT1P24752 427 aaKnown RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 FNTAP49354 379 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 HMGCS2P54868 508 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 WNT4P56705 351 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 EVCP57679 992 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 RBBP4Q09028 425 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 BECN1Q14457 450 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 KIAA0040Q15053 153 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 GSG1Q2KHT4 349 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 LRRC37A5PQ49AS3 106 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 RFTN2Q52LD8 501 aaPredicted RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 C9orf152Q5JTZ5 239 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 RBPMS2Q6ZRY4 209 aaKnown RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 NAXDQ8IW45 347 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 POGLUT1Q8NBL1 392 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 LINC00615Q96LM1 132 aaPredicted RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 CFAP57Q96MR6 1250 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 ALKBH7Q9BT30 221 aaPredicted RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 MXD3Q9BW11 206 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 PLEKHA3Q9HB20 300 aa1.32□□□□□ -2.2
PTPN22-203ENST00000460620 PHPT1Q9NRX4 125 aaPredicted RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 HBS1LQ9Y450 684 aaKnown RBP1.32□□□□□ -2.2
PTPN22-203ENST00000460620 A0A1W2PPW3 197 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 RSPH10B2B2RC85 870 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 TSC22D2O75157 780 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 RSPH10BP0C881 870 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 KRT3P12035 628 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 MC5RP33032 325 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 MDH2P40926 338 aaKnown RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 MFAP3P55082 362 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 CRMP1Q14194 572 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 ISXQ2M1V0 245 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 ZNF542PQ5EBM4 170 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 BMP2KLQ5H9B9 411 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 C9orf129Q5T035 196 aaKnown RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 NRARPQ7Z6K4 114 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 UBQLNLQ8IYU4 475 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 ZNF781Q8N8C0 355 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 XXYLT1Q8NBI6 393 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 RBM18Q96H35 190 aaKnown RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 MAGEB18Q96M61 343 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 EBF4Q9BQW3 602 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 NACAP1Q9BZK3 213 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 CLIC5Q9NZA1 410 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 FAM169AQ9Y6X4 670 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 IGKV6-21A0A0C4DH24 114 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 E5RGE8 158 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 TADA2AO75478 443 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 P0C879 139 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 ZNF17P17021 662 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 PSMA3P25788 255 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 CDX1P47902 265 aaPredicted RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 RGS7P49802 495 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 ZNF133P52736 654 aaPredicted RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 EIF5P55010 431 aaKnown RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 ADARP55265 1226 aaKnown RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 PEX3P56589 373 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 CNTN1Q12860 1018 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 MAPK11Q15759 364 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 C17orf58Q2M2W7 97 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 CELF3Q5SZQ8 465 aaKnown RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 MOXD1Q6UVY6 613 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 CLEC1AQ8NC01 280 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 LIPHQ8WWY8 451 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 EXT2Q93063 718 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 SECISBP2LQ93073 1101 aaKnown RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 GTPBP2Q9BX10 602 aaKnown RBP1.31□□□□□ -2.2
PTPN22-203ENST00000460620 UBQLN3Q9H347 655 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 LIME1Q9H400 295 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 DPEP2Q9H4A9 486 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 AMBNQ9NP70 447 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 SH3GLB2Q9NR46 395 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 MRGBPQ9NV56 204 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 RPS6KB2Q9UBS0 482 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 RPS6KA6Q9UK32 745 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 NSG2Q9Y328 171 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 HEG1Q9ULI3 1381 aa1.31□□□□□ -2.2
PTPN22-203ENST00000460620 PGRMC2O15173 223 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 LRRTM2O43300 516 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 PSMD10O75832 226 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 ZNF853P0CG23 659 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 PPP2R1AP30153 589 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 ACTN2P35609 894 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 SLC1A3P43003 542 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 CAPZA2P47755 286 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 SLC25A1P53007 311 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 RPS27AP62979 156 aaKnown RBP1.3□□□□□ -2.2
PTPN22-203ENST00000460620 PRKCEQ02156 737 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 ABRAXAS2Q15018 415 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 SPATA1Q5VX52 437 aa1.3□□□□□ -2.2
PTPN22-203ENST00000460620 SLC27A4Q6P1M0 643 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms