RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, human

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-215	ENST00000460158	OR10H2	O60403	315 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	SLC16A8	O95907	504 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	AGT	P01019	485 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	YES1	P07947	543 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	SBK2	P0C263	348 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	OR52Z1	P0C646	297 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	RSPH10B	P0C881	870 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	ZNF735	P0CB33	412 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	CALCB	P10092	127 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	CLU	P10909	449 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	HPGD	P15428	266 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	PFKFB1	P16118	471 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	ACP1	P24666	158 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	CYP2F1	P24903	491 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	CAPG	P40121	348 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	SERPINH1	P50454	418 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	RPS8	P62241	208 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	CSNK2B	P67870	215 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	MRPS15	P82914	257 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	LCP2	Q13094	533 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158		Q3ZCU0	254 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	SLC36A3	Q495N2	470 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	PRAMEF8	Q5VWM4	474 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	C19orf48	Q6RUI8	117 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	C1orf186	Q6ZWK4	172 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	SLC26A9	Q7LBE3	791 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	ABI3BP	Q7Z7G0	1075 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	SYCE1	Q8N0S2	351 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	LMNTD1	Q8N9Z9	388 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	PAPD5	Q8NDF8	572 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	OR5M8	Q8NGP6	311 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	OR10T2	Q8NGX3	314 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	ZNF473	Q8WTR7	871 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	UBLCP1	Q8WVY7	318 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	DNAJA4	Q8WW22	397 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	MSANTD3	Q96H12	275 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	KLHL5	Q96PQ7	755 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	PSKH2	Q96QS6	385 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	SECISBP2	Q96T21	854 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	KATNB1	Q9BVA0	655 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	MMP28	Q9H239	520 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	MINDY3	Q9H8M7	445 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	KCNK13	Q9HB14	408 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	SDF2L1	Q9HCN8	221 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	EQTN	Q9NQ60	294 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	PRMT7	Q9NVM4	692 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	TBC1D7	Q9P0N9	293 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	KIAA1257	Q9ULG3	409 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	UBE4B	O95155	1302 aa		3.1	□□□□□ -1.91
VPS8-215	ENST00000460158	WDR81	Q562E7	1941 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	MED19	A0JLT2	244 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	HYKK	A2RU49	373 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	FAM172BP	A6NC97	362 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158		K7ERQ8	282 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	LRRTM2	O43300	516 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	TLX2	O43763	284 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	KRT86	O43790	486 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	TSPAN1	O60635	241 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	B4GALT2	O60909	372 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	SERPINA3	P01011	423 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	NR3C1	P04150	777 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	IVL	P07476	585 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	OR2T7	P0C7T2	308 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	RPA2	P15927	270 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	GNAZ	P19086	355 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	ATP6V1C1	P21283	382 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	EPHA2	P29317	976 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	PTPN6	P29350	595 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	CDC25C	P30307	473 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	PKLR	P30613	574 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	OTX2	P32243	289 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	CA8	P35219	290 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	DCT	P40126	519 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	STAR	P49675	285 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	PLTP	P55058	493 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	HUNK	P57058	714 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	LINC01547	P58512	204 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	SRP54	P61011	504 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	HNRNPK	P61978	463 aa	Known RBP eCLIP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	RPS18	P62269	152 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	PPP1R8	Q12972	351 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	DMP1	Q13316	513 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	IL18	Q14116	193 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	IQCC	Q4KMZ1	466 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	ARMC12	Q5T9G4	340 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	TMPRSS11F	Q6ZWK6	438 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	ADAMTSL2	Q86TH1	951 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	CD302	Q8IX05	232 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	GPALPP1	Q8IXQ4	340 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	CPSF7	Q8N684	471 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	KLHDC9	Q8NEP7	349 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	STEAP2	Q8NFT2	490 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	OR52J3	Q8NH60	311 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	EXD1	Q8NHP7	514 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	C9orf43	Q8TAL5	461 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	FAM76A	Q8TAV0	307 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	RNF128	Q8TEB7	428 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	CKAP2	Q8WWK9	683 aa		3.09	□□□□□ -1.91
VPS8-215	ENST00000460158	ROBO4	Q8WZ75	1007 aa		3.09	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms