RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 DEPPQ9NTK1 212 aa7.34□□□□□ -1.23
HPS4-207ENST00000459918 INTS10Q9NVR2 710 aaKnown RBP7.34□□□□□ -1.23
HPS4-207ENST00000459918 MTRF1LQ9UGC7 380 aaKnown RBP7.34□□□□□ -1.23
HPS4-207ENST00000459918 TRMT6Q9UJA5 497 aaKnown RBP7.34□□□□□ -1.23
HPS4-207ENST00000459918 CBLCQ9ULV8 474 aa7.34□□□□□ -1.23
HPS4-207ENST00000459918 FAM215AQ9Y5M1 114 aa7.34□□□□□ -1.23
HPS4-207ENST00000459918 LIPGQ9Y5X9 500 aa7.34□□□□□ -1.23
HPS4-207ENST00000459918 TRGV5A0A0B4J1U4 118 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 A0A0G2JMM0 328 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 A0A1W2PPB8 328 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 A0A1W2PRS3 328 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 HSPB2A8KAH6 182 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 KIR3DP1A8MWS1 328 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 CLDN4O14493 209 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 LCE2BO14633 110 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 ARHGEF9O43307 516 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 NRDCO43847 1150 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 LCMT2O60294 686 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 OR6B1O95007 311 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 C8GP07360 202 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 GABRA1P14867 456 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 TNNI3P19429 210 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 ADH7P40394 386 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 SOX3P41225 446 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 SKIV2L2P42285 1042 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 DNASE1L1P49184 302 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 RGS4P49798 205 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 ASCL1P50553 236 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 ADARP55265 1226 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 KCNJ2P63252 427 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 NKX6-1P78426 367 aaPredicted RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 SARNPP82979 210 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 CTBP1Q13363 440 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 PWP1Q13610 501 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 DHX34Q14147 1143 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 CSHL1Q14406 222 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 RBBP5Q15291 538 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 POU4F3Q15319 338 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 RPS6KA1Q15418 735 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 HSPB2Q16082 182 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 TOR1AIP1Q5JTV8 583 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 NEPROQ6NW34 567 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 HSDL2Q6YN16 418 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 C16orf47Q6ZP98 133 aaPredicted RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 RTL4Q6ZR62 310 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 TRILQ7L0X0 811 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 CLNKQ7Z7G1 428 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 CILP2Q8IUL8 1156 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 LIX1LQ8IVB5 337 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 LRRC56Q8IYG6 542 aaPredicted RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 MYO1HQ8N1T3 1032 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 TMEM251Q8N6I4 163 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 APCDD1LQ8NCL9 501 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 GIMAP7Q8NHV1 300 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 CCT6BQ92526 530 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 KCNJ9Q92806 393 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 ZNF669Q96BR6 464 aaPredicted RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 PYCR2Q96C36 320 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 MBD6Q96DN6 1003 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 JSRP1Q96MG2 331 aaPredicted RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 TSNARE1Q96NA8 513 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 CNPPD1Q9BV87 410 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 FRMD8P1Q9BZ68 369 aaPredicted RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 ZDHHC11Q9H8X9 412 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 EIF2B3Q9NR50 452 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 HOMER3Q9NSC5 361 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 SACM1LQ9NTJ5 587 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 ARL15Q9NXU5 204 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 ZFATQ9P243 1243 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 SOX13Q9UN79 622 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 MRPS33Q9Y291 106 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 DYRK1BQ9Y463 629 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 MAD1L1Q9Y6D9 718 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 EPN1Q9Y6I3 576 aaPredicted RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 CLCA3PQ9Y6N3 262 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.33□□□□□ -1.24
HPS4-207ENST00000459918 VPS13CQ709C8 3753 aa7.33□□□□□ -1.24
HPS4-207ENST00000459918 C15orf38-AP3S2A0A0A6YYH1 394 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 TRBC2A0A5B9 178 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 EEF1E1-BLOC1S5C9J1V9 151 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 GFYI3L273 518 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 CES2O00748 559 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 AQP7O14520 342 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 EEF1E1O43324 174 aaKnown RBP7.32□□□□□ -1.24
HPS4-207ENST00000459918 DNAJB6O75190 326 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 ATE1O95260 518 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 CELA3AP09093 270 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 CNR1P21554 472 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 ARNTP27540 789 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 PPP2R1BP30154 601 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 RPL22P35268 128 aaKnown RBP7.32□□□□□ -1.24
HPS4-207ENST00000459918 DCAF7P61962 342 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 BTN3A2P78410 334 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 KIF5AQ12840 1032 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 SLC10A1Q14973 349 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 TERF2Q15554 542 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 OASLQ15646 514 aaKnown RBP7.32□□□□□ -1.24
HPS4-207ENST00000459918 ZNF750Q32MQ0 723 aa7.32□□□□□ -1.24
HPS4-207ENST00000459918 RIPPLY2Q5TAB7 128 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms