RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 POP5Q969H6 163 aaKnown RBP11.1□□□□□ -0.63
UBE2L3-202ENST00000458578 TRIM63Q969Q1 353 aa11.1□□□□□ -0.63
UBE2L3-202ENST00000458578 CIDECQ96AQ7 238 aaPredicted RBP11.1□□□□□ -0.63
UBE2L3-202ENST00000458578 RNF170Q96K19 258 aa11.1□□□□□ -0.63
UBE2L3-202ENST00000458578 FAM120CQ9NX05 1096 aaKnown RBP11.1□□□□□ -0.63
UBE2L3-202ENST00000458578 KCTD5Q9NXV2 234 aa11.1□□□□□ -0.63
UBE2L3-202ENST00000458578 PLXNA4Q9HCM2 1894 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 C2orf78A6NCI8 922 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 C6orf47O95873 294 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 GPC1P35052 558 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 KIR2DL3P43628 341 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 HBA1P69905 142 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 BCL2L1Q07817 233 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ABRQ12979 859 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 QPRTQ15274 297 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 C5orf22Q49AR2 442 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ATP13A5Q4VNC0 1218 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 RNF130Q86XS8 419 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 IQCF1Q8N6M8 205 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 DTX3Q8N9I9 347 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 HJURPQ8NCD3 748 aaPredicted RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ATP6V1C2Q8NEY4 427 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 UBTD2Q8WUN7 234 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ZNF717Q9BY31 904 aaPredicted RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 UCK2Q9BZX2 261 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SLA2Q9H6Q3 261 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 RNF121Q9H920 327 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 NMNAT1Q9HAN9 279 aaPredicted RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 HSPB11Q9Y547 144 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 COL4A4P53420 1690 aaPredicted RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ADAMTS4O75173 837 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 TNFRSF21O75509 655 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 TNNI3P19429 210 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 APEX1P27695 318 aaKnown RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 OR1D2P34982 312 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 CHI3L1P36222 383 aaPredicted RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 CSKP41240 450 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SLC11A1P49279 550 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 RPS26P62854 115 aaKnown RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 EFR3AQ14156 821 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 TATDN3Q17R31 274 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 WDR45BQ5MNZ6 344 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SDE2Q6IQ49 451 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 PLET1Q6UQ28 207 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 LSRQ86X29 649 aaPredicted RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ZFP41Q8N8Y5 198 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 GRPEL2Q8TAA5 225 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ZIC5Q96T25 663 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SLC35A5Q9BS91 424 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 LINC00597Q9H2U6 94 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SGK2Q9HBY8 427 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ASAH2Q9NR71 780 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 GPATCH2Q9NW75 528 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 TMEM161AQ9NX61 479 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 MAT2BQ9NZL9 334 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SSR3Q9UNL2 185 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 HCN4Q9Y3Q4 1203 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 VWA8A3KMH1 1905 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SCAMP2O15127 329 aaKnown RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SEPT4O43236 478 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ARHGEF9O43307 516 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 STC2O76061 302 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 HBQ1P09105 142 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 RPS3P23396 243 aaKnown RBP eCLIP11.09□□□□□ -0.631e-9■■■■■ 32.6
UBE2L3-202ENST00000458578 UQCRC1P31930 480 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 LIMK1P53667 647 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 CRISP1P54107 249 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 PRKCZQ05513 592 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 CDH18Q13634 790 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 LARS2Q15031 903 aaKnown RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ZNF385BQ569K4 471 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 MLIPQ5VWP3 458 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SIGIRRQ6IA17 410 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 FRMPD2BQ6IN97 320 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 FUT10Q6P4F1 479 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 DPY19L3Q6ZPD9 716 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 VWA5B2Q8N398 1253 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 TCEANCQ8N8B7 351 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 NLGN4YQ8NFZ3 816 aaPredicted RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 C9orf43Q8TAL5 461 aaPredicted RBP11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SETD6Q8TBK2 473 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 DEDD2Q8WXF8 326 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 C1GALT1C1Q96EU7 318 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 HTATIP2Q9BUP3 242 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 C3orf14Q9HBI5 128 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 ACER3Q9NUN7 267 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 NLKQ9UBE8 527 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 SNX11Q9Y5W9 270 aa11.09□□□□□ -0.63
UBE2L3-202ENST00000458578 A0A075B6Q4 140 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 NPIPB15A6NHN6 443 aaPredicted RBP11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 OR2AG2A6NM03 316 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 TLR4O00206 839 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 MYL12BO14950 172 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 SH3BP5O60239 455 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 SDC2P34741 201 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 SPAM1P38567 509 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 CRYBB2P43320 205 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 MAN2A2P49641 1150 aa11.08□□□□□ -0.64
UBE2L3-202ENST00000458578 GPR17Q13304 367 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms