RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TMEM179BQ7Z7N9 219 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 AMIGO1Q86WK6 493 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 FBXL6Q8N531 539 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 AMER3Q8N944 861 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 LZICQ8WZA0 190 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 FCRL4Q96PJ5 515 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 TRIM4Q9C037 500 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 FBRSQ9HAH7 460 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 C8orf4Q9NR00 106 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 TAAR2Q9P1P5 351 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 SCML1Q9UN30 329 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 MTCH2Q9Y6C9 303 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 STK25O00506 426 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 C8orf89P0DMQ9 161 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 ELK4P28324 431 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 GSTT1P30711 240 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 PCDH1Q08174 1060 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 NFATC4Q14934 902 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 PRRT3Q5FWE3 981 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 C8orf59Q8N0T1 100 aaPredicted RBP13.03□□□□□ -0.32
CLK3-203ENST00000454830 CCDC90BQ9GZT6 254 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 KLHL31Q9H511 634 aa13.03□□□□□ -0.32
CLK3-203ENST00000454830 ARHGEF17Q96PE2 2063 aaPredicted RBP13.03□□□□□ -0.32
CLK3-203ENST00000454830 UPK1AO00322 258 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 BTN3A3O00478 584 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 HAT1O14929 419 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 MITFO75030 526 aaPredicted RBP13.02□□□□□ -0.32
CLK3-203ENST00000454830 ALPLP05186 524 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 ILF3Q12906 894 aaKnown RBP eCLIP13.02□□□□□ -0.32
CLK3-203ENST00000454830 KCNAB2Q13303 367 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 NEDD8Q15843 81 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 CNPY1Q3B7I2 92 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 TOR1AIP1Q5JTV8 583 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 Q6ZSR6 202 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 SVOPLQ8N434 492 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 ABHD11Q8NFV4 315 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 ZCCHC10Q8TBK6 192 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 TPSD1Q9BZJ3 242 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 C3orf18Q9UK00 162 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 SNX11Q9Y5W9 270 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 CKAP5Q14008 2032 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 TRIOO75962 3097 aa13.02□□□□□ -0.32
CLK3-203ENST00000454830 TDRD6O60522 2096 aaKnown RBP13.02□□□□□ -0.33
CLK3-203ENST00000454830 TMPRSS11DO60235 418 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 POLR2CP19387 275 aaPredicted RBP13.02□□□□□ -0.33
CLK3-203ENST00000454830 MYF6P23409 242 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 PKLRP30613 574 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 POLR2IP36954 125 aaKnown RBP13.02□□□□□ -0.33
CLK3-203ENST00000454830 BCL6P41182 706 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 CDK6Q00534 326 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 IL5RAQ01344 420 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 C1orf61Q13536 156 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 MPEG1Q2M385 716 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 CEACAM20Q6UY09 585 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 ZNF761Q86XN6 746 aaPredicted RBP13.02□□□□□ -0.33
CLK3-203ENST00000454830 OR2L8Q8NGY9 312 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 PATE1Q8WXA2 126 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 MSLNLQ96KJ4 702 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 GPR174Q9BXC1 333 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 ZNF451Q9Y4E5 1061 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 GABRG2P18507 467 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 IGFBP5P24593 272 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 PXNP49023 591 aaPredicted RBP13.02□□□□□ -0.33
CLK3-203ENST00000454830 AGERQ15109 404 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 ADRM1Q16186 407 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 PRSS53Q2L4Q9 553 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 TTC23Q5W5X9 447 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 OR4C11Q6IEV9 310 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 EIF3MQ7L2H7 374 aaKnown RBP13.02□□□□□ -0.33
CLK3-203ENST00000454830 LPCAT2Q7L5N7 544 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 PATL1Q86TB9 770 aaKnown RBP13.02□□□□□ -0.33
CLK3-203ENST00000454830 HIPK1Q86Z02 1210 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 UCN3Q969E3 161 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 TM4SF18Q96CE8 201 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 MAGIXQ9H6Y5 334 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 CD320Q9NPF0 282 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 WASH6PQ9NQA3 447 aa13.02□□□□□ -0.33
CLK3-203ENST00000454830 MUC22E2RYF6 1773 aaPredicted RBP13.01□□□□□ -0.33
CLK3-203ENST00000454830 A0A0J9YVX5 310 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 ANHXE9PGG2 379 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 B4GAT1O43505 415 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 VIPP01282 170 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 CTSEP14091 401 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 IL7RP16871 459 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 DDCP20711 480 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 BSGP35613 385 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 TEAD4Q15561 434 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 ADGRF3Q8IZF5 1079 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 METTL25Q8N6Q8 603 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 OR2L3Q8NG85 312 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 BMFQ96LC9 184 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 YIPF4Q9BSR8 244 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 C6orf106Q9H6K1 298 aaPredicted RBP13.01□□□□□ -0.33
CLK3-203ENST00000454830 CXorf36Q9H7Y0 433 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 VNN3Q9NY84 501 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 FAM32AQ9Y421 112 aaKnown RBP13.01□□□□□ -0.33
CLK3-203ENST00000454830 HEBP2Q9Y5Z4 205 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 A0A087WXM4 84 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 TMEM247A6NEH6 219 aa13.01□□□□□ -0.33
CLK3-203ENST00000454830 PTGES3LE9PB15 166 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms