RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SPATS1Q496A3 300 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 TECPR1Q7Z6L1 1165 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 C8orf4Q9NR00 106 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF860A6NHJ4 632 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 KRT75O95678 551 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 IFNA14P01570 189 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 C9P02748 559 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 IFNW1P05000 195 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 PBX2P40425 430 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 DSTNP60981 165 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 LASP1Q14847 261 aaKnown RBP11.45□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF750Q32MQ0 723 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 RBM48Q5RL73 367 aaKnown RBP11.45□□□□□ -0.58
SMPD4-213ENST00000454468 C6orf183Q5T699 404 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 EIF3MQ7L2H7 374 aaKnown RBP11.45□□□□□ -0.58
SMPD4-213ENST00000454468 P2RY8Q86VZ1 359 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 TRIM48Q8IWZ4 208 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 AQP11Q8NBQ7 271 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 WFIKKN2Q8TEU8 576 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 HDAC2Q92769 488 aaKnown RBP11.45□□□□□ -0.58
SMPD4-213ENST00000454468 UBE2E3Q969T4 207 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 RELTQ969Z4 430 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 SEMA3GQ9NS98 782 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 CABIN1Q9Y6J0 2220 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 IGLV3-16A0A075B6K0 115 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 NDUFS4O43181 175 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 APODP05090 189 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 PPP2R2BQ00005 443 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 EMX1Q04741 257 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-213ENST00000454468 SPCS2Q15005 226 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 KIAA1614Q5VZ46 1190 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMPD4-213ENST00000454468 FRMD1Q8N878 549 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 OR8K5Q8NH50 307 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 WDR20Q8TBZ3 569 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 OTUB2Q96DC9 234 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 CEP19Q96LK0 163 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 DOHHQ9BU89 302 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 POLE4Q9NR33 117 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 PHPT1Q9NRX4 125 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-213ENST00000454468 PSME2Q9UL46 239 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 CACNA1CQ13936 2221 aa11.45□□□□□ -0.58
SMPD4-213ENST00000454468 KCNE1BA0A087WTH5 132 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PCDH17O14917 1159 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PDPK1O15530 556 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 FRS3O43559 492 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 RASGRP1O95267 797 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 DNTTP04053 509 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 OR12D1P0DN82 309 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 DDX5P17844 614 aaKnown RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PTX3P26022 381 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 NCBP2P52298 156 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 DGLUCYQ7Z3D6 616 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PTOV1Q86YD1 416 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 GALNT13Q8IUC8 556 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PAPD5Q8NDF8 572 aaKnown RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 UCN3Q969E3 161 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 FCRL4Q96PJ5 515 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 RPP25Q9BUL9 199 aaKnown RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 GPR83Q9NYM4 423 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 TAS2R16Q9NYV7 291 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 WDR37Q9Y2I8 494 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 IRAK3Q9Y616 596 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PRUNE2Q8WUY3 3088 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 XIRP2A4UGR9 3374 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 AGAP14A8MT82 685 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 GFRA2O00451 464 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 RPN2P04844 631 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 STSP08842 583 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 ACADMP11310 421 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 CD72P21854 359 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 HTR1BP28222 390 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SLC16A1P53985 500 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 WNT3P56703 355 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 RUNX3Q13761 415 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 LRRC32Q14392 662 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 WSCD2Q2TBF2 565 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 ENPP7Q6UWV6 458 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 MTSS1LQ765P7 747 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 DCUN1D3Q8IWE4 304 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 OR4N5Q8IXE1 308 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 GPR65Q8IYL9 337 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SLC15A4Q8N697 577 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PRR14Q9BWN1 585 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SLC28A3Q9HAS3 691 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SIRT5Q9NXA8 310 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SERGEFQ9UGK8 458 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 STON1Q9Y6Q2 735 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 SCN2AQ99250 2005 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 WDR87Q6ZQQ6 2873 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 A0A1W2PQU0 124 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 CNOT3O75175 753 aaKnown RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 BCAS1O75363 584 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 PPIBP23284 216 aaKnown RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 ITGB7P26010 798 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 AK4P27144 223 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-213ENST00000454468 GJA4P35212 333 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 MAPK9P45984 424 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 MASP1P48740 699 aa11.44□□□□□ -0.58
SMPD4-213ENST00000454468 CCR8P51685 355 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms