RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 OR7G3Q8NG95 312 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 OR1N1Q8NGS0 311 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 UBE2E3Q969T4 207 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 SERINC2Q96SA4 455 aa28.17■■■□□ 2.1
CCDC117-206ENST00000453543 BARD1Q99728 777 aaKnown RBP28.17■■■□□ 2.1
CCDC117-206ENST00000453543 TCRBV16S1A1N1A0A5B0 115 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 RIPK2O43353 540 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 SH3BGRLO75368 114 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 GCAP28676 217 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 HNRNPFP52597 415 aaKnown RBP28.16■■■□□ 2.1
CCDC117-206ENST00000453543 MTTPP55157 894 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 RAB38P57729 211 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 PCBP2Q15366 365 aaKnown RBP eCLIP28.16■■■□□ 2.1
CCDC117-206ENST00000453543 NR6A1Q15406 480 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 TRMT10CQ7L0Y3 403 aaKnown RBP28.16■■■□□ 2.1
CCDC117-206ENST00000453543 MYLK4Q86YV6 388 aaPredicted RBP28.16■■■□□ 2.1
CCDC117-206ENST00000453543 GSPT2Q8IYD1 628 aaKnown RBP28.16■■■□□ 2.1
CCDC117-206ENST00000453543 RNF175Q8N4F7 328 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 FAM47BQ8NA70 645 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 TMEM52Q8NDY8 209 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 COPS7BQ9H9Q2 264 aaPredicted RBP28.16■■■□□ 2.1
CCDC117-206ENST00000453543 PRM3Q9NNZ6 103 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 PRDM7Q9NQW5 492 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 STMN3Q9NZ72 180 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 XPR1Q9UBH6 696 aa28.16■■■□□ 2.1
CCDC117-206ENST00000453543 ESPL1Q14674 2120 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 TGFB1P01137 390 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 GOLGA7Q7Z5G4 137 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 PTGR2Q8N8N7 351 aaPredicted RBP28.15■■■□□ 2.1
CCDC117-206ENST00000453543 SCYL1Q96KG9 808 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 NPAS2Q99743 824 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 TXLNGYQ9BZA5 131 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 RNF32Q9H0A6 362 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 TEKT2Q9UIF3 430 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 MMACHCQ9Y4U1 282 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 DOPEY2Q9Y3R5 2298 aa28.15■■■□□ 2.1
CCDC117-206ENST00000453543 RTCAO00442 366 aaKnown RBP28.14■■■□□ 2.1
CCDC117-206ENST00000453543 E2F3O00716 465 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 RBP1P09455 135 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 LIM2P55344 173 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 TGM3Q08188 693 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 GTF2H2Q13888 395 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 ACER2Q5QJU3 275 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 GTF2H2CQ6P1K8 395 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 ZNF793Q6ZN11 406 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 CRLF3Q8IUI8 442 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 SCUBE1Q8IWY4 988 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 KIF2BQ8N4N8 673 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 FAM26EQ8N5C1 309 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 GRHL3Q8TE85 626 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 KCNC2Q96PR1 638 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 CSF3RQ99062 836 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP28.14■■■□□ 2.1
CCDC117-206ENST00000453543 ACTR8Q9H981 624 aa28.14■■■□□ 2.1
CCDC117-206ENST00000453543 TNPO3Q9Y5L0 923 aaKnown RBP28.14■■■□□ 2.1
CCDC117-206ENST00000453543 TRAV17A0A0B4J275 112 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 SAGE2PA6NJ88 616 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 A8MUA0 341 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 TGFBR3LH3BV60 316 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 MAN1A2O60476 641 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 SNRPAP09012 282 aaKnown RBP28.13■■■□□ 2.09
CCDC117-206ENST00000453543 ST13P50502 369 aaKnown RBP28.13■■■□□ 2.09
CCDC117-206ENST00000453543 DDX39BQ13838 428 aaKnown RBP28.13■■■□□ 2.09
CCDC117-206ENST00000453543 TSNAXIP1Q2TAA8 658 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 BEST3Q8N1M1 668 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 ARMC2Q8NEN0 867 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 PHF21BQ96EK2 531 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 ZNF354BQ96LW1 612 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 OR51B5Q9H339 312 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 PRTFDC1Q9NRG1 225 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 DAPP1Q9UN19 280 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 CLDN16Q9Y5I7 305 aa28.13■■■□□ 2.09
CCDC117-206ENST00000453543 OR5H15A6NDH6 313 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 SAP18O00422 153 aaKnown RBP28.12■■■□□ 2.09
CCDC117-206ENST00000453543 CYR61O00622 381 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 CBX6O95503 412 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 COL6A2P12110 1019 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 EEF1DP29692 281 aaKnown RBP28.12■■■□□ 2.09
CCDC117-206ENST00000453543 SERPINB1P30740 379 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 EIF2S3LQ2VIR3 472 aaKnown RBP28.12■■■□□ 2.09
CCDC117-206ENST00000453543 TMEM35AQ53FP2 167 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 LIPJQ5W064 366 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 HUS1BQ8NHY5 278 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 ELP5Q8TE02 316 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 ADAMTS18Q8TE60 1221 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 CMTM7Q96FZ5 175 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 IPPKQ9H8X2 491 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 AGPAT4Q9NRZ5 378 aa28.12■■■□□ 2.09
CCDC117-206ENST00000453543 ATP5A1P25705 553 aaKnown RBP28.11■■■□□ 2.09
CCDC117-206ENST00000453543 PPP2R1BP30154 601 aa28.11■■■□□ 2.09
CCDC117-206ENST00000453543 SLC13A2Q13183 592 aa28.11■■■□□ 2.09
CCDC117-206ENST00000453543 RPUSD3Q6P087 351 aaKnown RBP28.11■■■□□ 2.09
CCDC117-206ENST00000453543 SRFBP1Q8NEF9 429 aaKnown RBP28.11■■■□□ 2.09
CCDC117-206ENST00000453543 NFAM1Q8NET5 270 aaPredicted RBP28.11■■■□□ 2.09
CCDC117-206ENST00000453543 TBCDQ9BTW9 1192 aa28.11■■■□□ 2.09
CCDC117-206ENST00000453543 SORBS1Q9BX66 1292 aaKnown RBP28.11■■■□□ 2.09
CCDC117-206ENST00000453543 EPB41L4BQ9H329 900 aa28.11■■■□□ 2.09
CCDC117-206ENST00000453543 DMRT3Q9NQL9 472 aa28.11■■■□□ 2.09
CCDC117-206ENST00000453543 KCMF1Q9P0J7 381 aa28.11■■■□□ 2.09
CCDC117-206ENST00000453543 RNF11Q9Y3C5 154 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms